NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS82497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82497.1 Public Homo sapiens 2 SEPTIN10 24 110 108 CCDS HistoryNCBI Gene:151011Re-query CCDS DB by CCDS ID:82497.1Re-query CCDS DB by GeneID:151011See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82497.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356688.8 ENSP00000349116.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356688.8Link to Ensembl Protein Viewer:ENSP00000349116.4Re-query CCDS DB by Nucleotide ID:ENST00000356688Re-query CCDS DB by Protein ID:ENSP00000349116
Original member Current member NCBI NM_001321498.2 NP_001308427.1 Accepted alive Link to Nucleotide Sequence:NM_001321498.2Link to Protein Sequence:NP_001308427.1Re-query CCDS DB by Nucleotide ID:NM_001321498Re-query CCDS DB by Protein ID:NP_001308427Link to BLAST:NP_001308427.1

Chromosomal Locations for CCDS 82497.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 109544122 109544324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109545460 109545542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109546050 109546237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109553087 109553219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109564366 109564534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109565763 109565859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109567815 109567976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109574581 109574767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109585126 109585321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109585721 109585838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109593051 109593119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 109613798 109613827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGCCTCCTCCGAGGTGGCGCGGCACCTGCTCTTTCAGTCTCACATGGCAACGAAAACAACTTGTATGT
CTTCACAAGGATCAGATGATGAACAGATAAAAAGAGAAAACATTCGTTCGTTGACTATGTCTGGCCATGT
TGGTTTTGAGAGTTTGCCTGATCAGCTGGTGAACAGATCCATTCAGCAAGGTTTCTGCTTTAATATTCTC
TGTGTGGGGGAAACTGGAATTGGAAAATCAACACTGATTGACACATTGTTTAATACTAATTTTGAAGACT
ATGAATCCTCACATTTTTGCCCAAATGTTAAACTTAAAGCTCAGACATATGAACTCCAGGAAAGTAATGT
TCAATTGAAATTGACCATTGTGAATACAGTGGGATTTGGTGACCAAATAAATAAAGAAGAGAGCTACCAA
CCAATAGTTGACTACATAGATGCTCAGTTTGAGGCCTATCTCCAAGAAGAACTGAAGATTAAGCGTTCTC
TCTTTACCTACCATGATTCTCGCATCCATGTGTGTCTCTACTTCATTTCACCGACAGGCCACTCTCTGAA
GACACTTGATCTCTTAACCATGAAGAACCTTGACAGCAAGGTAAACATTATACCAGTGATTGCCAAAGCA
GATACGGTTTCTAAAACTGAATTACAGAAGTTTAAGATCAAGCTCATGAGTGAATTGGTCAGCAATGGCG
TCCAGATATACCAGTTCCCAACGGATGATGACACTATTGCTAAGGTCAACGCTGCAATGAATGGACAGTT
GCCGTTTGCTGTTGTGGGAAGTATGGATGAGGTAAAAGTCGGAAACAAGATGGTCAAAGCTCGCCAGTAC
CCTTGGGGTGTTGTACAAGTGGAAAATGAAAACCACTGTGACTTTGTAAAGCTGCGGGAAATGCTCATTT
GTACAAATATGGAGGACCTGCGAGAGCAGACCCATACCAGGCACTATGAGCTTTACAGGCGCTGCAAACT
GGAGGAAATGGGCTTTACAGATGTGGGCCCAGAAAACAAGCCAGTCAGTGTTCAAGAGACCTATGAAGCC
AAAAGACATGAGTTCCATGGTGAACGTCAGAGGAAGGAAGAAGAAATGAAACAGATGTTTGTGCAGCGAG
TAAAGGAGAAAGAAGCCATATTGAAAGAAGCTGAGAGAGAGCTACAGGCCAAATTTGAGCACCTTAAGAG
ACTTCACCAAGAAGAGAGAATGAAGCTTGAAGAAAAGAGAAGACTTTTGGAAGAAGAAATAATTGCTTTC
TCTAAAAAGAAAGCTACCTCCGAGATATTTCACAGCCAGTCCTTTCTGGCAACAGGCAGCAACCTGAGGA
AGGACAAGGACCGTAAGAAGGAACCAGGCTGTCGATTCGAACTCCTGTGCATTGATGTCAGAGCTTGTGA
AACCAATGGTGGACGTAAAGACGCAGAGAAAGCTCCAATTTTTTGTAAAACAGAAGTTCCAGAGCACAGA
AGGTCATCATCACAAGCAAACTTTATTAAAAAAAAACTAGAAGTGTGCTTTGATTTTGCTGTTATTTGTT
TTATCACTTCTATATTTGGTGAACAGCCACAGTTACTGATATTTATGGAAAAGTACTTTCAAGTACAAGG
TCAATACATAAGCCAGAGTGAATGA

Translation (544 aa):
MASSEVARHLLFQSHMATKTTCMSSQGSDDEQIKRENIRSLTMSGHVGFESLPDQLVNRSIQQGFCFNIL
CVGETGIGKSTLIDTLFNTNFEDYESSHFCPNVKLKAQTYELQESNVQLKLTIVNTVGFGDQINKEESYQ
PIVDYIDAQFEAYLQEELKIKRSLFTYHDSRIHVCLYFISPTGHSLKTLDLLTMKNLDSKVNIIPVIAKA
DTVSKTELQKFKIKLMSELVSNGVQIYQFPTDDDTIAKVNAAMNGQLPFAVVGSMDEVKVGNKMVKARQY
PWGVVQVENENHCDFVKLREMLICTNMEDLREQTHTRHYELYRRCKLEEMGFTDVGPENKPVSVQETYEA
KRHEFHGERQRKEEEMKQMFVQRVKEKEAILKEAERELQAKFEHLKRLHQEERMKLEEKRRLLEEEIIAF
SKKKATSEIFHSQSFLATGSNLRKDKDRKKEPGCRFELLCIDVRACETNGGRKDAEKAPIFCKTEVPEHR
RSSSQANFIKKKLEVCFDFAVICFITSIFGEQPQLLIFMEKYFQVQGQYISQSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH