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Report for CCDS65712.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65712.1 Public Homo sapiens 1 MAEL 24 110 108 CCDS HistoryNCBI Gene:84944Re-query CCDS DB by CCDS ID:65712.1Re-query CCDS DB by GeneID:84944See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 65712.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367870.6 ENSP00000356844.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367870.6Link to Ensembl Protein Viewer:ENSP00000356844.2Re-query CCDS DB by Nucleotide ID:ENST00000367870Re-query CCDS DB by Protein ID:ENSP00000356844
Original member Current member NCBI NM_001286377.2 NP_001273306.1 Accepted alive Link to Nucleotide Sequence:NM_001286377.2Link to Protein Sequence:NP_001273306.1Re-query CCDS DB by Nucleotide ID:NM_001286377Re-query CCDS DB by Protein ID:NP_001273306Link to BLAST:NP_001273306.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273306.1 403 Q96JY0-2 403 100% 0 0

Chromosomal Locations for CCDS 65712.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 166989353 166989484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166991378 166991477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166992686 166992841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 166994028 166994069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167004180 167004304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167005076 167005130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167005256 167005397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167016222 167016284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167017827 167017959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167021085 167021160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 167021668 167021855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1212 nt):
ATGCCGAACCGTAAGGCCAGCCGGAATGCTTACTATTTCTTCGTGCAGGAGAAGATCCCCGAACTACGGC
GACGAGGCCTGCCTGTGGCTCGCGTTGCTGATGCCATCCCTTACTGCTCCTCAGACTGGGCGAAACCTGT
TTTCACACCACTGAGGAGGCCAGGCATGCTTGTACCAAAGCAGAATGTTTCACCTCCAGATATGTCAGCT
TTGTCTTTAAAAGGTGATCAAGCTCTCCTTGGAGGCATTTTTTATTTTTTGAACATTTTTAGCCATGGCG
AGCTACCTCCTCATTGTGAACAGCGCTTCCTCCCTTGTGAAATTGGCTGTGTTAAGTATTCTCTCCAAGA
AGGTATTATGGCAGATTTCCACAGTTTTATAAATCCTGGTGAAATTCCACGAGGATTTCGATTTCATTGT
CAGGCTGCAAGTGATTCTAGTCACAAGATTCCTATTTCAAATTTTGAACGTGGGCATAACCAAGCAACTG
TGTTACAAAACCTTTATAGATTTATTCATCCCAACCCAGGGAACTGGCCACCTATCTACTGCAAGTCTGA
TGATAGAACCAGAGTCAACTGGTGTTTGAAGCATATGGCAAAGGCATCAGAAATCAGGCAAGATCTACAA
CTTCTCACTGTAGAGGACCTTGTAGTGGGGATCTACCAACAAAAATTTCTCAAGGAGCCCTCTAAGACTT
GGATTCGAAGCCTCCTAGATGTGGCCATGTGGGATTATTCTAGCAACACAAGGTGCAAGTGGCATGAAGA
AAATGATATTCTCTTCTGTGCTTTAGCTGTTTGCAAGAAGATTGCGTACTGCATCAGTAATTCTCTGGCC
ACTCTCTTTGGAATCCAGCTCACAGAGGCTCATGTACCACTACAAGATTATGAGGCCAGCAATAGTGTGA
CACCCAAAATGGTTGTATTGGATGCAGGGCGTTACCAGAAGCTAAGGGTTGGGAGTTCAGGATTCTCTCA
TTTCAACTCTTCTAATGAGGAACAAAGATCAAACACACCCATTGGTGACTACCCATCTAGGGCAAAAATT
TCTGGCCAAAACAGCAGCGTTCGGGGAAGAGGAATTACCCGCTTACTAGAGAGCATTTCCAATTCTTCCA
GCAATATCCACAAATTCTCCAACTGTGACACTTCACTCTCACCTTACATGTCCCAAAAAGATGGATACAA
ATCTTTCTCTTCCTTATCTTAA

Translation (403 aa):
MPNRKASRNAYYFFVQEKIPELRRRGLPVARVADAIPYCSSDWAKPVFTPLRRPGMLVPKQNVSPPDMSA
LSLKGDQALLGGIFYFLNIFSHGELPPHCEQRFLPCEIGCVKYSLQEGIMADFHSFINPGEIPRGFRFHC
QAASDSSHKIPISNFERGHNQATVLQNLYRFIHPNPGNWPPIYCKSDDRTRVNWCLKHMAKASEIRQDLQ
LLTVEDLVVGIYQQKFLKEPSKTWIRSLLDVAMWDYSSNTRCKWHEENDILFCALAVCKKIAYCISNSLA
TLFGIQLTEAHVPLQDYEASNSVTPKMVVLDAGRYQKLRVGSSGFSHFNSSNEEQRSNTPIGDYPSRAKI
SGQNSSVRGRGITRLLESISNSSSNIHKFSNCDTSLSPYMSQKDGYKSFSSLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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