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Report for CCDS14610.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14610.1 Public Homo sapiens X DCAF12L1 24 110 108 CCDS HistoryNCBI Gene:139170Re-query CCDS DB by CCDS ID:14610.1Re-query CCDS DB by GeneID:139170See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14610.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371126.3 ENSP00000360167.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371126.3Link to Ensembl Protein Viewer:ENSP00000360167.1Re-query CCDS DB by Nucleotide ID:ENST00000371126Re-query CCDS DB by Protein ID:ENSP00000360167
Original member Current member NCBI NM_178470.5 NP_848565.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178470.5Link to Protein Sequence:NP_848565.2Re-query CCDS DB by Nucleotide ID:NM_178470Re-query CCDS DB by Protein ID:NP_848565Link to BLAST:NP_848565.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848565.2 463 Q5VU92 463 100% 0 0

Chromosomal Locations for CCDS 14610.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 126551217 126552608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGCCCAGCAGCAAACAGGTAGCAGGAAACGGAAAGCGCCCGCGGTCGAGGCGGACGCCGAGAGCTCGC
CGTCGCAGGGCTTGGCGGCAGCGGACGGTGAGGGGCCGCTGCTACTCAAGAGGCAGAGGCGGCCGGCGAC
GTATCGCTCGATGGCGCACTATCTGAAGGTTCGGGAGGTAGGCGGGTGGGGCCCCGCCAGGCTCCAGGGC
TTCGATGGCGAGCTGCGGGGCTACGCGGTACAGAGGCTGCCCGAGCTGCTGACGGAGCGCCAACTGGAGC
TGGGCACGGTCAACAAGGTGTTCGCGTCACAGTGGCTGAACTCCAGGCAGGTGGTGTGCGGCACCAAGTG
TAACACGCTTTTCGTGGTGGACGTGGAGTCAGGCCACATCGCGCGCATTCCCCTCTTGCGGGACAGTGAG
GCCAGGCTGGCCCAGGACCAACAGGGCTGCGGCATCCATGCCATCGAGCTGAATCCCTCCAAGACGCTTC
TGGCCACCGGCGGCGAAAACCCCAACAGCCTGGCCATCTACCAGCTGCCCTCCCTGGATCCCCTGTGCCT
GGGCGACCGCCATGGCCACAAGGACTGGATCTTCGCCGTCGCCTGGCTGAGTGACACCGTAGCCGTGAGC
GGCTCCCGCGACGGCACTGTGGCGCTGTGGCGGATGGACCCGGACAAGTTCGATGACACTGTTGCCTGGC
ATAGCGAGGTGGGTCTCCCCGTATATGCCCACATCCGTCCGAGGGATGTGGAGGCCATCCCCAGGGCCAT
CATCAACCCCAGTAACCGCAAGGTGCGGGCCCTGGCCTGCGGCGGCAAGAACCAGGAACTGGGAGCGGTG
TCCTTGGACGGCTACTTCCACCTGTGGAAAGCCGGGAGCGCACTATCCAGGCTGCTGTCCATCAGGCTGC
CCTACTTCCGGGATAATGTGTGCCTGACCTACTGTGATGATATGTCTGTGTACGCCGTGGGCTCCCATTC
CCACGTCTCTTTCCTGGATCTGCGCCAGGACCAGCAGAACATCCGGCCCCTGTGTTCTCGAGAGGGTGGC
ACAGGCGTGCGGTCGCTGAGCTTCTACCGCCACATCATCACTGTGGGCACCGGTCAGGGCTCCCTGCTCT
TCTATGACGTCCGGGCCCAGAAATTCCTGGAGGAAAGAGCCTCCGCCACCCTGGAGTCCTCTTCGGGACC
TGCAAGGAGGAAGCTCAGGCTTGCCTGTGGCAGAGGCTGGCTCAACCACAATGATTTCTGGGTGAATTAC
TTTGGTGGCATGGAAGTGTTTCCCAATGCGCTCTACACCCACTGCTACAACTGGCCTGAGATGAAGCTCT
TTGTGGCTGGGGGGCCTCTCCCTGCAGGCCTCCATGGGAACTATGCAGGCCTCTGGAGCTAA

Translation (463 aa):
MAQQQTGSRKRKAPAVEADAESSPSQGLAAADGEGPLLLKRQRRPATYRSMAHYLKVREVGGWGPARLQG
FDGELRGYAVQRLPELLTERQLELGTVNKVFASQWLNSRQVVCGTKCNTLFVVDVESGHIARIPLLRDSE
ARLAQDQQGCGIHAIELNPSKTLLATGGENPNSLAIYQLPSLDPLCLGDRHGHKDWIFAVAWLSDTVAVS
GSRDGTVALWRMDPDKFDDTVAWHSEVGLPVYAHIRPRDVEAIPRAIINPSNRKVRALACGGKNQELGAV
SLDGYFHLWKAGSALSRLLSIRLPYFRDNVCLTYCDDMSVYAVGSHSHVSFLDLRQDQQNIRPLCSREGG
TGVRSLSFYRHIITVGTGQGSLLFYDVRAQKFLEERASATLESSSGPARRKLRLACGRGWLNHNDFWVNY
FGGMEVFPNALYTHCYNWPEMKLFVAGGPLPAGLHGNYAGLWS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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