CCDS Report for Consensus CDS

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Report for CCDS4814.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
4814.1	Public	Homo sapiens	6	SLC26A8	24	110	108

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4814.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000394602.6	ENSP00000378100.2		Accepted	alive
		NCBI	NM_138718.3	NP_619732.2		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_619732.2	865	Q96RN1-2	865	100%	0	0

Chromosomal Locations for CCDS 4814.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)

Genome Browser links:

Chromosome	Start	Stop
6	35943900	35944340
6	35951163	35951347
6	35951445	35951499
6	35955152	35955520
6	35959460	35959591
6	35959714	35959806
6	35960843	35960912
6	35960993	35961099
6	35962526	35962621
6	35968877	35968954
6	35975375	35975488
6	35977204	35977351
6	35982121	35982203
6	35997738	35997919
6	35999992	36000108
6	36012233	36012372
6	36019520	36019707

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2598 nt):
ATGGCACAACTAGAGAGGAGCGCCATCTCTGGCTTCAGCTCTAAGTCCAGGCGAAACTCATTCGCATATG ATGTTAAGCGTGAAGTATACAATGAGGAGACCTTTCAACAGGAACACAAAAGGAAGGCCTCCTCTTCTGG GAACATGAACATCAACATCACCACCTTCAGACACCACGTCCAGTGCCGCTGCTCATGGCACAGGTTCCTA CGATGCGTGCTTACAATCTTTCCCTTCCTAGAATGGATGTGTATGTATCGATTAAAGGATTGGCTTCTGG GAGACTTACTTGCTGGTATAAGTGTTGGCCTTGTGCAAGTTCCCCAAGGCCTGACACTTAGTTTGCTGGC AAGGCAACTGATTCCTCCTCTCAACATCGCTTATGCAGCTTTCTGTTCTTCGGTAATCTATGTAATTTTT GGATCGTGTCATCAAATGTCCATTGGTTCCTTCTTCCTGGTGAGTGCTCTGCTGATCAACGTTCTGAAAG TGAGCCCATTCAACAACGGTCAACTGGTCATGGGATCTTTCGTCAAGAATGAGTTTTCGGCCCCCTCCTA CCTTATGGGCTATAATAAATCCTTGAGTGTGGTGGCAACCACAACTTTTCTGACTGGGATTATTCAGATT ATTGGCTTCACTGTGATTGCAAACAAGATAAGCATGGCCACAGAAACCAGCCAGACGCTTATTGACATGA TTCCTTATAGCTTTCTGCTTCCTGTAACACCAGATTTCAGCCTTCTTCCCAAGATAATTTTACAAGCCTT CTCCTTATCTTTGGTGAGCTCCTTTCTGCTCATATTTCTGGGCAAGAAGATTGCCAGTCTTCACAATTAC AGTGTCAATTCCAACCAGGATTTAATAGCCATCGGCCTTTGCAATGTCGTCAGTTCATTTTTCAGATCTT GTGTGTTTACTGGTGCTATTGCTAGGACTATTATCCAGGATAAATCTGGAGGAAGACAACAGTTTGCATC TCTGGTAGGCGCAGGTGTGATGCTGCTCCTGATGGTGAAGATGGGACACTTTTTCTACACACTGCCAAAT GCTGTGCTGGCTGGTATTATTCTGAGCAACGTCATTCCCTACCTTGAAACCATTTCTAACCTACCCAGCC TGTGGAGGCAGGACCAATATGACTGTGCTCTTTGGATGATGACATTCTCATCTTCAATTTTCCTGGGACT GGACATTGGACTAATTATCTCAGTAGTTTCTGCTTTCTTCATCACCACTGTTCGTTCACACAGAGCTAAG ATTCTTCTCCTGGGTCAAATCCCTAACACCAACATTTATAGAAGCATCAATGATTATCGGGAGATCATCA CCATTCCTGGGGTGAAAATCTTCCAGTGCTGCAGCTCAATTACATTTGTAAATGTTTACTACCTAAAGCA TAAGCTGTTAAAAGAGGTTGATATGGTAAAGGTGCCTCTTAAAGAAGAAGAAATTTTCAGCTTGTTTAAT TCAAGTGACACCAATCTACAAGGAGGAAAGATTTGCAGGTGTTTCTGCAACTGTGATGATCTGGAGCCGC TGCCCAGGATTCTTTACACAGAGCGATTTGAAAATAAACTGGATCCCGAAGCATCCTCCATTAACCTGAT TCACTGCTCACATTTTGAGAGCATGAACACAAGCCAAACTGCATCCGAAGACCAAGTGCCATACACAGTA TCGTCCGTGTCTCAGAAAAATCAAGGGCAACAGTATGAGGAGGTGGAGGAAGTTTGGCTTCCTAATAACT CATCAAGAAACAGCTCACCAGGACTGCCTGATGTGGCGGAAAGCCAGGGGAGGAGATCACTCATCCCTTA CTCAGATGCGTCTCTACTGCCCAGTGTCCACACCATCATCCTGGATTTCTCCATGGTACACTACGTGGAT TCACGGGGGTTAGTCGTATTAAGACAGATATGCAATGCCTTTCAAAACGCCAACATTTTGATACTCATTG CAGGGTGTCACTCTTCCATAGTCAGGGCATTTGAGAGGAATGATTTCTTTGACGCTGGCATCACCAAGAC CCAGCTGTTCCTCAGCGTTCACGACGCCGTGCTGTTTGCCTTGTCAAGGAAGGTCATAGGCTCCTCTGAG TTAAGCATCGATGAATCCGAGACAGTGATACGGGAAACCTACTCAGAAACAGACAAGAATGACAATTCAA GATATAAAATGAGCAGCAGTTTTCTAGGAAGCCAAAAAAATGTAAGTCCAGGCTTCATCAAGATCCAACA GCCTGTAGAAGAGGAGTCGGAGTTGGATTTGGAGCTGGAATCAGAACAAGAGGCTGGGCTGGGTCTGGAC CTAGACCTGGATCGGGAGCTGGAGCCTGAAATGGAGCCCAAGGCTGAGACCGAGACCAAGACCCAGACCG AGATGGAGCCCCAGCCTGAGACTGAGCCTGAGATGGAGCCCAACCCCAAATCTAGGCCAAGAGCTCACAC TTTTCCTCAGCAGCGTTACTGGCCTATGTATCATCCGTCTATGGCTTCCACCCAGTCTCAGACTCAGACT CGGACATGGTCAGTGGAGAGGAGACGCCATCCTATGGATTCATACTCACCAGAGGGCAACAGCAATGAAG ATGTCTAG
Translation (865 aa):
MAQLERSAISGFSSKSRRNSFAYDVKREVYNEETFQQEHKRKASSSGNMNINITTFRHHVQCRCSWHRFL RCVLTIFPFLEWMCMYRLKDWLLGDLLAGISVGLVQVPQGLTLSLLARQLIPPLNIAYAAFCSSVIYVIF GSCHQMSIGSFFLVSALLINVLKVSPFNNGQLVMGSFVKNEFSAPSYLMGYNKSLSVVATTTFLTGIIQI IGFTVIANKISMATETSQTLIDMIPYSFLLPVTPDFSLLPKIILQAFSLSLVSSFLLIFLGKKIASLHNY SVNSNQDLIAIGLCNVVSSFFRSCVFTGAIARTIIQDKSGGRQQFASLVGAGVMLLLMVKMGHFFYTLPN AVLAGIILSNVIPYLETISNLPSLWRQDQYDCALWMMTFSSSIFLGLDIGLIISVVSAFFITTVRSHRAK ILLLGQIPNTNIYRSINDYREIITIPGVKIFQCCSSITFVNVYYLKHKLLKEVDMVKVPLKEEEIFSLFN SSDTNLQGGKICRCFCNCDDLEPLPRILYTERFENKLDPEASSINLIHCSHFESMNTSQTASEDQVPYTV SSVSQKNQGQQYEEVEEVWLPNNSSRNSSPGLPDVAESQGRRSLIPYSDASLLPSVHTIILDFSMVHYVD SRGLVVLRQICNAFQNANILILIAGCHSSIVRAFERNDFFDAGITKTQLFLSVHDAVLFALSRKVIGSSE LSIDESETVIRETYSETDKNDNSRYKMSSSFLGSQKNVSPGFIKIQQPVEEESELDLELESEQEAGLGLD LDLDRELEPEMEPKAETETKTQTEMEPQPETEPEMEPNPKSRPRAHTFPQQRYWPMYHPSMASTQSQTQT RTWSVERRRHPMDSYSPEGNSNEDV

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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