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Report for CCDS4713.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4713.1 Public Homo sapiens 6 ABHD16A 24 110 108 CCDS HistoryNCBI Gene:7920Re-query CCDS DB by CCDS ID:4713.1Re-query CCDS DB by GeneID:7920See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4713.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395952.8 ENSP00000379282.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395952.8Link to Ensembl Protein Viewer:ENSP00000379282.3Re-query CCDS DB by Nucleotide ID:ENST00000395952Re-query CCDS DB by Protein ID:ENSP00000379282
Original member Current member NCBI NM_021160.3 NP_066983.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021160.3Link to Protein Sequence:NP_066983.1Re-query CCDS DB by Nucleotide ID:NM_021160Re-query CCDS DB by Protein ID:NP_066983Link to BLAST:NP_066983.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066983.1 558 O95870-1 558 100% 0 0

Chromosomal Locations for CCDS 4713.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31687212 31687295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31687498 31687544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31687642 31687740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31687824 31687900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31688041 31688103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31688249 31688305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31688723 31688786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31689015 31689119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31689581 31689704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31690078 31690127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31690539 31690602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31691579 31691680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31691804 31691918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31693027 31693149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31693359 31693432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31696948 31697033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31700942 31701028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31701274 31701340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31702074 31702130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 31703150 31703281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1677 nt):
ATGGCGAAGCTGCTGAGCTGCGTCCTAGGCCCCCGGCTCTACAAAATCTACCGGGAGAGGGACTCTGAAA
GGGCCCCGGCCAGCGTCCCTGAGACGCCAACGGCAGTCACTGCCCCCCATTCCAGCTCCTGGGATACGTA
CTATCAGCCCCGTGCCCTGGAGAAACATGCTGACAGCATCCTGGCACTGGCTTCAGTATTCTGGTCCATC
TCTTATTACTCCTCTCCCTTCGCCTTCTTCTACTTGTACAGGAAAGGTTACTTGAGTTTGTCCAAAGTGG
TGCCGTTTTCTCACTATGCTGGGACATTGCTGCTACTTCTGGCAGGTGTGGCCTGCCTCCGAGGCATTGG
CCGCTGGACCAACCCCCAGTACCGGCAGTTCATCACCATCTTGGAAGCAACACATCGGAACCAGTCTTCA
GAAAACAAGAGGCAGCTTGCCAACTACAACTTTGACTTCCGGAGCTGGCCAGTCGACTTCCACTGGGAAG
AACCCAGCAGCCGGAAGGAGTCTCGAGGGGGCCCTTCCCGCCGGGGTGTGGCCCTGCTTCGCCCAGAGCC
CCTGCACCGGGGGACAGCAGACACCCTCCTCAACCGGGTTAAGAAGCTGCCTTGTCAGATCACCAGCTAC
CTGGTGGCGCACACCCTAGGGCGCCGGATGCTGTATCCAGGCTCTGTGTACCTGCTGCAGAAGGCCCTCA
TGCCTGTGCTGCTGCAGGGCCAGGCCCGACTGGTGGAAGAGTGTAATGGGCGCCGGGCAAAGCTGCTGGC
CTGTGATGGCAATGAGATTGACACCATGTTTGTGGACCGGCGGGGGACAGCTGAGCCCCAGGGACAGAAG
CTGGTGATCTGCTGTGAGGGGAATGCTGGGTTTTATGAGGTGGGCTGCGTCTCCACGCCCCTGGAAGCTG
GATATTCAGTCCTGGGCTGGAATCATCCAGGCTTTGCTGGAAGCACGGGGGTGCCATTCCCGCAGAATGA
GGCTAATGCCATGGATGTGGTGGTCCAGTTTGCCATCCACCGCCTAGGCTTCCAGCCCCAGGACATCATC
ATCTACGCCTGGTCCATCGGCGGCTTCACTGCCACGTGGGCAGCCATGTCCTACCCAGATGTTAGTGCCA
TGATCCTGGATGCCTCCTTTGATGACCTGGTGCCCTTGGCCTTGAAGGTCATGCCAGACAGCTGGAGGGG
CCTGGTGACCAGGACCGTGAGGCAGCATCTCAATCTAAACAACGCGGAGCAGCTGTGCAGATACCAGGGT
CCTGTACTGCTGATCCGGAGAACCAAGGATGAGATCATCACCACCACGGTTCCTGAGGACATCATGTCCA
ACCGAGGCAATGACCTCCTGCTGAAGCTCCTGCAGCATCGGTATCCCCGGGTGATGGCAGAGGAGGGTCT
TCGAGTGGTGAGGCAGTGGTTGGAGGCCTCCTCACAGCTGGAGGAAGCCTCAATTTATAGCCGATGGGAG
GTGGAAGAGGACTGGTGTCTGTCTGTCCTCCGCTCCTACCAGGCAGAACACGGGCCCGACTTCCCCTGGA
GCGTGGGGGAGGACATGAGTGCAGATGGACGGCGGCAGCTGGCTTTGTTTCTGGCTCGGAAGCATCTGCA
CAACTTTGAGGCCACTCACTGCACCCCACTCCCAGCCCAGAACTTCCAGATGCCCTGGCACCTCTAG

Translation (558 aa):
MAKLLSCVLGPRLYKIYRERDSERAPASVPETPTAVTAPHSSSWDTYYQPRALEKHADSILALASVFWSI
SYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFITILEATHRNQSS
ENKRQLANYNFDFRSWPVDFHWEEPSSRKESRGGPSRRGVALLRPEPLHRGTADTLLNRVKKLPCQITSY
LVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNGRRAKLLACDGNEIDTMFVDRRGTAEPQGQK
LVICCEGNAGFYEVGCVSTPLEAGYSVLGWNHPGFAGSTGVPFPQNEANAMDVVVQFAIHRLGFQPQDII
IYAWSIGGFTATWAAMSYPDVSAMILDASFDDLVPLALKVMPDSWRGLVTRTVRQHLNLNNAEQLCRYQG
PVLLIRRTKDEIITTTVPEDIMSNRGNDLLLKLLQHRYPRVMAEEGLRVVRQWLEASSQLEEASIYSRWE
VEEDWCLSVLRSYQAEHGPDFPWSVGEDMSADGRRQLALFLARKHLHNFEATHCTPLPAQNFQMPWHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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