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Report for CCDS68182.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
68182.1 Public Homo sapiens 21 MAP3K7CL 24 110 108 CCDS HistoryNCBI Gene:56911Re-query CCDS DB by CCDS ID:68182.1Re-query CCDS DB by GeneID:56911See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 68182.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339024.8 ENSP00000345777.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339024.8Link to Ensembl Protein Viewer:ENSP00000345777.4Re-query CCDS DB by Nucleotide ID:ENST00000339024Re-query CCDS DB by Protein ID:ENSP00000345777
Original member Current member EBI ENST00000399925.5 ENSP00000382809.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399925.5Link to Ensembl Protein Viewer:ENSP00000382809.1Re-query CCDS DB by Nucleotide ID:ENST00000399925Re-query CCDS DB by Protein ID:ENSP00000382809
Original member Current member EBI ENST00000399926.5 ENSP00000382810.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399926.5Link to Ensembl Protein Viewer:ENSP00000382810.1Re-query CCDS DB by Nucleotide ID:ENST00000399926Re-query CCDS DB by Protein ID:ENSP00000382810
Original member Current member EBI ENST00000399928.6 ENSP00000382812.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399928.6Link to Ensembl Protein Viewer:ENSP00000382812.1Re-query CCDS DB by Nucleotide ID:ENST00000399928Re-query CCDS DB by Protein ID:ENSP00000382812
Original member Current member EBI ENST00000399934.5 ENSP00000382816.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399934.5Link to Ensembl Protein Viewer:ENSP00000382816.1Re-query CCDS DB by Nucleotide ID:ENST00000399934Re-query CCDS DB by Protein ID:ENSP00000382816
Original member Current member EBI ENST00000399935.6 ENSP00000382817.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399935.6Link to Ensembl Protein Viewer:ENSP00000382817.2Re-query CCDS DB by Nucleotide ID:ENST00000399935Re-query CCDS DB by Protein ID:ENSP00000382817
Original member Current member NCBI NM_001286617.2 NP_001273546.1 Accepted alive Link to Nucleotide Sequence:NM_001286617.2Link to Protein Sequence:NP_001273546.1Re-query CCDS DB by Nucleotide ID:NM_001286617Re-query CCDS DB by Protein ID:NP_001273546Link to BLAST:NP_001273546.1
Original member Current member NCBI NM_001286618.2 NP_001273547.1 Accepted alive Link to Nucleotide Sequence:NM_001286618.2Link to Protein Sequence:NP_001273547.1Re-query CCDS DB by Nucleotide ID:NM_001286618Re-query CCDS DB by Protein ID:NP_001273547Link to BLAST:NP_001273547.1
Original member Current member NCBI NM_001286619.2 NP_001273548.1 Accepted alive Link to Nucleotide Sequence:NM_001286619.2Link to Protein Sequence:NP_001273548.1Re-query CCDS DB by Nucleotide ID:NM_001286619Re-query CCDS DB by Protein ID:NP_001273548Link to BLAST:NP_001273548.1
Original member Current member NCBI NM_001286620.2 NP_001273549.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286620.2Link to Protein Sequence:NP_001273549.1Re-query CCDS DB by Nucleotide ID:NM_001286620Re-query CCDS DB by Protein ID:NP_001273549Link to BLAST:NP_001273549.1
Original member Current member NCBI NM_001371372.1 NP_001358301.1 Accepted alive Link to Nucleotide Sequence:NM_001371372.1Link to Protein Sequence:NP_001358301.1Re-query CCDS DB by Nucleotide ID:NM_001371372Re-query CCDS DB by Protein ID:NP_001358301Link to BLAST:NP_001358301.1
Original member Current member NCBI NM_001371373.1 NP_001358302.1 Accepted alive Link to Nucleotide Sequence:NM_001371373.1Link to Protein Sequence:NP_001358302.1Re-query CCDS DB by Nucleotide ID:NM_001371373Re-query CCDS DB by Protein ID:NP_001358302Link to BLAST:NP_001358302.1
Original member Current member NCBI NM_001371374.1 NP_001358303.1 Accepted alive Link to Nucleotide Sequence:NM_001371374.1Link to Protein Sequence:NP_001358303.1Re-query CCDS DB by Nucleotide ID:NM_001371374Re-query CCDS DB by Protein ID:NP_001358303Link to BLAST:NP_001358303.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273546.1 142 P57077-4 142 100% 0 0
NP_001273547.1 142 P57077-4 142 100% 0 0
NP_001273548.1 142 P57077-4 142 100% 0 0
NP_001273549.1 142 P57077-4 142 100% 0 0
NP_001358301.1 142 P57077-4 142 100% 0 0
NP_001358302.1 142 P57077-4 142 100% 0 0
NP_001358303.1 142 P57077-4 142 100% 0 0

Chromosomal Locations for CCDS 68182.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 29133345 29133414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29149189 29149250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29159941 29160056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 29174712 29174892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGATCAGCACAGCCAGGGTACCTGCTGACAAGCCTGTACGCATCGCCTTTAGCCTCAATGACGCCTCAG
ATGATACACCCCCTGAAGACTCCATTCCTTTGGTCTTTCCAGAATTAGACCAGCAGCTACAGCCCCTGCC
GCCTTGTCATGACTCCGAGGAATCCATGGAGGTGTTCAAACAGCACTGCCAAATAGCAGAAGAATACCAT
GAGGTCAAAAAGGAAATCACCCTGCTTGAGCAAAGGAAGAAGGAGCTCATTGCCAAGTTAGATCAGGCAG
AAAAGGAGAAGGTGGATGCTGCTGAGCTGGTTCGGGAATTCGAGGCTCTGACGGAGGAGAATCGGACGTT
GAGGTTGGCCCAGTCTCAATGTGTGGAACAACTGGAGAAACTTCGAATACAGTATCAGAAGAGGCAGGGC
TCGTCCTAA

Translation (142 aa):
MISTARVPADKPVRIAFSLNDASDDTPPEDSIPLVFPELDQQLQPLPPCHDSEESMEVFKQHCQIAEEYH
EVKKEITLLEQRKKELIAKLDQAEKEKVDAAELVREFEALTEENRTLRLAQSQCVEQLEKLRIQYQKRQG
SS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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