CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS45539.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
45539.1 |
Public |
Homo sapiens |
16 |
GSE1 |
24 |
110 |
108 |
|
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 45539.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENST00000405402.6 |
ENSP00000384839.2 |
|
Accepted |
alive |
|
|
|
NCBI |
NM_001134473.3 |
NP_001127945.1 |
|
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001127945.1 |
1113 |
Q14687-2 |
1113 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 45539.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3342 nt): ATGGGCCCTATCATCGTCCCCCCTGGGGGCCACAGCGTGCCCAGCACCCCCCCCGTGGTGACCATCGCTC CAACCAAAACCGTGAATGGTGTCTGGAGGAGTGAGAGCCGGCAGGATGCCGGCTCCAGGAGCAGCAGTGG AGGTCGGGAACGCCTCATTGTGGAGCCCCCGCTCCCTCAGGAGAAGGCAGGGGGACCAGCCATCCCCTCG CACCTGCTCAGCACCCCCTACCCCTTCGGCCTCTCCCCCAGCTCAGTTGTGCAGGATTCCCGCTTCCCGC CACTCAACCTCCAGCGGCCCGTGCACCACGTGGTGCCCCCCAGTACCGTGACCGAGGACTACCTGAGAAG CTTCCGGCCCTACCACACCACCGACGACCTCCGCATGTCCTCACTGCCTCCCCTCGGCCTGGACCCGGCC ACTGCTGCAGCCTACTACCACCCCAGCTACCTGGCCCCACACCCCTTCCCCCACCCGGCCTTCAGGATGG ACGACTCCTACTGCCTGTCTGCCCTGAGGTCCCCGTTCTACCCCATCCCCACCCCCGGCTCCCTGCCCCC ACTGCACCCATCAGCGATGCACCTGCACCTCTCTGGGGTCCGCTACCCTCCCGAGCTCTCCCACTCATCC CTGGCAGCGCTGCACTCGGAGCGCATGTCTGGCCTCAGCGCGGAGAGGCTGCAGATGGACGAGGAGCTAA GGCGGGAGAGGGAGCGCGAGCGCGAGCGCGAGCGTGAGCGTGAGGCTGACCGCGAGCGGGAGAAGGAACG TGAGCGCGAACGCGAGAAGGAGCGCGAGCAAGAGAAGGAGCGTGAGCGTGAGAAGGAGCGCGAGCGCGAG CTGGAGCGCCAGCGGGAGCAGCGGGCCCGGGAGAAGGAGCTGCTGGCCGCCAAGGCCCTGGAGCCCAGCT TCCTGCCCGTGGCCGAGCTGCATGGGCTGCGTGGCCATGCCACTGAGGAGCGGGGCAAGCCCTCGGAGCA GCTGACCCCAACCCGAGCAGAGAAGCTGAAGGATGCCGGCCTGCAGGCGCCCAAGCCCGTCCAACACCCC TTGCATCCGGTGCCCACCCCACACCACACGGTGCCCAGCCTCATCTCCAACCATGGCATCTTCTCTCTGC CTAGCAGCAGTGCTGCCACAGCCCTGCTGATCCAGCGCACCAATGAGGAGGAGAAGTGGCTGGCGCGGCA GCGGCGGCTGCGGCAGGAGAAGGAGGACCGGCAGTCTCAGGTGTCCGAGTTCCGGCAGCAGGTGCTGGAG CAGCACCTGGATATGGGCCGGCCCCCGGTGCCGGCGGAGGCAGAGCACAGGCCGGAGAGCACCACCAGGC CAGGACCAAACCGTCACGAGCCAGGTGGCCGTGACCCTCCGCAGCACTTTGGGGGGCCACCACCTCTGAT TTCGCCCAAGCCCCAGCTCCATGCTGCACCCACGGCCCTCTGGAACCCCGTGTCCCTGATGGACAACACC TTGGAGACGCGGCGGGCCGAAAGCCACTCTCTGCACAGCCACCCGGCTGCATTTGAGCCCAGCCGCCAGG CAGCCGTGCCGCTGGTGAAGGTGGAGCGGGTCTTCTGCCCGGAGAAAGCAGAGGAGGGGCCACGGAAGCG TGAGCCTGCCCCTCTGGACAAGTACCAGCCACCTCCGCCGCCACCACGAGAGGGAGGGAGCCTGGAGCAC CAGCCCTTCCTGCCCGGGCCCGGGCCCTTCCTGGCTGAGCTCGAGAAGTCCACCCAGACCATCCTGGGCC AGCAGCGGGCCTCCCTCCCACAGGCGGCCACCTTCGGGGAGCTCAGCGGACCCCTGAAGCCTGGCTCGCC CTACCGGCCCCCAGTGCCACGGGCCCCCGACCCTGCCTACATCTATGATGAGTTCCTGCAGCAGCGCCGG AGGCTGGTCAGCAAGCTGGACCTGGAGGAGCGCAGGCGGCGGGAGGCCCAGGAGAAAGGGTACTACTACG ACCTCGATGACTCTTACGACGAGAGCGATGAGGAGGAGGTCAGGGCCCACCTCCGTTGCGTGGCCGAGCA GCCGCCCCTCAAACTGGACACGTCCTCTGAGAAGCTAGAGTTTTTGCAACTTTTTGGCTTGACCACCCAA CAGCAGAAGGAGGAATTGGTGGCCCAGAAGCGGAGGAAGCGGCGGAGGATGCTGCGAGAGAGAAGCCCGT CGCCCCCAACAATTCAGAGCAAGCGGCAGACGCCTTCACCGAGACTGGCGCTGTCTACCCGCTACAGCCC TGATGAGATGAACAACAGTCCCAACTTCGAAGAAAAGAAGAAGTTCCTGACCATCTTCAACCTGACCCAC ATCAGCGCTGAGAAGAGGAAAGACAAAGAGAGACTTGTTGAAATGCTCCGTGCCATGAAGCAGAAGGCAC TGTCAGCAGCAGTGGCCGACTCCTTGACAAACTCTCCGAGGGACAGTCCTGCCGTCTCCCTGAGTGAACC AGCCACGCAGCAAGCCTCTCTGGATGTGGAGAAGCCGGTTGGTGTTGCTGCTTCCTTGTCTGACATCCCA AAGGCCGCGGAGCCTGGGAAGCTGGAACAGGTCCGGCCCCAGGAGCTGTCGAGAGTCCAGGAGCTAGCTC CTGCCAGCGGGGAGAAGGCCAGGCTGAGCGAGGCCCCTGGAGGCAAAAAGAGTCTGAGCATGCTTCACTA TATCCGGGGCGCTGCACCCAAGGACATTCCTGTGCCGCTGTCCCACAGCACCAATGGGAAGAGCAAGCCG TGGGAGCCCTTTGTGGCAGAAGAGTTTGCACATCAGTTCCACGAGTCAGTGCTGCAGTCCACCCAGAAGG CCCTGCAGAAGCATAAAGGGAGCGTGGCTGTGCTGTCTGCAGAGCAGAACCACAAGGTTGACACGTCCGT CCACTACAACATTCCTGAGCTGCAGTCCTCCAGCCGCGCCCCTCCACCCCAGCACAATGGGCAGCAGGAG CCCCCCACTGCAAGGAAGGGCCCCCCAACCCAGGAGTTGGACCGGGACTCGGAGGAGGAGGAAGAGGAGG ATGATGAAGATGGAGAAGATGAGGAGGAAGTCCCCAAGCGCAAGTGGCAAGGGATCGAGGCCGTTTTTGA AGCTTACCAGGAACACATAGAAGAGCAAAATCTGGAGCGGCAGGTGTTACAGACACAATGTAGACGACTG GAGGCCCGGCACTACAGCCTCAGCCTGACGGCAGAGCAGCTCTCCCACAGCGTGGCGGAGTTGAGGAGCC AGAAACAGAAGATGGTCTCAGAAAGGGAGCGGCTCCAGGCAGAACTGGACCACTTACGAAAGTGCCTTGC CTTGCCTGCAATGCACTGGCCTAGGGGCTACCTGAAGGGATATCCCAGGTGA
Translation (1113 aa): MGPIIVPPGGHSVPSTPPVVTIAPTKTVNGVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPS HLLSTPYPFGLSPSSVVQDSRFPPLNLQRPVHHVVPPSTVTEDYLRSFRPYHTTDDLRMSSLPPLGLDPA TAAAYYHPSYLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPSAMHLHLSGVRYPPELSHSS LAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKEREQEKEREREKERERE LERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEERGKPSEQLTPTRAEKLKDAGLQAPKPVQHP LHPVPTPHHTVPSLISNHGIFSLPSSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVLE QHLDMGRPPVPAEAEHRPESTTRPGPNRHEPGGRDPPQHFGGPPPLISPKPQLHAAPTALWNPVSLMDNT LETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVFCPEKAEEGPRKREPAPLDKYQPPPPPPREGGSLEH QPFLPGPGPFLAELEKSTQTILGQQRASLPQAATFGELSGPLKPGSPYRPPVPRAPDPAYIYDEFLQQRR RLVSKLDLEERRRREAQEKGYYYDLDDSYDESDEEEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQ QQKEELVAQKRRKRRRMLRERSPSPPTIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKKKFLTIFNLTH ISAEKRKDKERLVEMLRAMKQKALSAAVADSLTNSPRDSPAVSLSEPATQQASLDVEKPVGVAASLSDIP KAAEPGKLEQVRPQELSRVQELAPASGEKARLSEAPGGKKSLSMLHYIRGAAPKDIPVPLSHSTNGKSKP WEPFVAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKVDTSVHYNIPELQSSSRAPPPQHNGQQE PPTARKGPPTQELDRDSEEEEEEDDEDGEDEEEVPKRKWQGIEAVFEAYQEHIEEQNLERQVLQTQCRRL EARHYSLSLTAEQLSHSVAELRSQKQKMVSERERLQAELDHLRKCLALPAMHWPRGYLKGYPR
|