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Report for CCDS46350.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46350.1 Public Homo sapiens 2 KCMF1 24 110 108 CCDS HistoryNCBI Gene:56888Re-query CCDS DB by CCDS ID:46350.1Re-query CCDS DB by GeneID:56888See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46350.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409785.9 ENSP00000386738.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409785.9Link to Ensembl Protein Viewer:ENSP00000386738.3Re-query CCDS DB by Nucleotide ID:ENST00000409785Re-query CCDS DB by Protein ID:ENSP00000386738
Original member Current member NCBI NM_020122.5 NP_064507.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020122.5Link to Protein Sequence:NP_064507.3Re-query CCDS DB by Nucleotide ID:NM_020122Re-query CCDS DB by Protein ID:NP_064507Link to BLAST:NP_064507.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064507.3 381 Q9P0J7 381 100% 0 0

Chromosomal Locations for CCDS 46350.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 84971452 84971467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85027889 85028056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85035016 85035155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85043564 85043665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85046104 85046278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85049366 85049648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 85053148 85053409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGTCCCGACATGAAGGTGTCAGCTGTGATGCATGTTTAAAAGGAAATTTTCGAGGTCGCAGATATAAGT
GTTTAATTTGCTACGATTACGATCTTTGTGCATCTTGTTATGAAAGTGGTGCAACAACAACAAGGCATAC
AACTGACCACCCAATGCAGTGCATATTAACAAGGGTAGATTTTGATTTATACTATGGTGGGGAAGCTTTC
TCTGTAGAGCAGCCACAGTCTTTTACTTGTCCCTATTGTGGAAAAATGGGCTATACGGAGACATCTCTTC
AAGAACATGTTACTTCTGAACATGCAGAAACATCAACAGAAGTGATTTGTCCAATATGTGCAGCGTTACC
TGGAGGCGATCCTAATCATGTCACGGATGACTTTGCAGCTCATCTTACACTTGAACACAGAGCCCCTAGA
GATTTAGATGAATCGAGTGGTGTTCGACATGTACGTAGAATGTTTCACCCTGGCCGGGGATTAGGAGGTC
CTCGTGCTCGTAGATCAAACATGCACTTTACTAGCAGTTCTACTGGTGGACTTTCTTCTTCTCAGAGTTC
ATATTCTCCAAGCAATAGGGAAGCCATGGATCCTATAGCTGAGCTTTTATCTCAGTTATCAGGAGTGAGA
CGTTCTGCAGGAGGACAGCTTAATTCCTCTGGCCCTTCCGCTTCTCAGTTACAACAACTGCAGATGCAGC
TGCAGCTAGAACGGCAGCATGCCCAGGCAGCACGGCAACAACTGGAGACCGCACGCAACGCAACCCGGCG
TACTAACACAAGCAGTGTCACCACTACAATCACACAATCCACAGCAACAACCAACATAGCTAATACAGAA
AGCAGTCAGCAGACTCTACAGAATTCCCAGTTTCTTTTAACAAGGTTGAATGATCCTAAAATGTCTGAAA
CGGAGCGCCAGTCCATGGAAAGCGAGCGTGCAGACCGCAGCCTGTTTGTCCAAGAGCTCCTTCTGTCCAC
TTTAGTGCGTGAAGAGAGCTCATCCTCAGATGAGGATGATCGGGGGGAGATGGCAGATTTTGGTGCTATG
GGCTGTGTAGATATTATGCCTTTAGATGTTGCTTTAGAAAACCTAAATTTAAAAGAGAGTAATAAAGGAA
ATGAGCCTCCACCACCTCCTCTTTGA

Translation (381 aa):
MSRHEGVSCDACLKGNFRGRRYKCLICYDYDLCASCYESGATTTRHTTDHPMQCILTRVDFDLYYGGEAF
SVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPR
DLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTSSSTGGLSSSQSSYSPSNREAMDPIAELLSQLSGVR
RSAGGQLNSSGPSASQLQQLQMQLQLERQHAQAARQQLETARNATRRTNTSSVTTTITQSTATTNIANTE
SSQQTLQNSQFLLTRLNDPKMSETERQSMESERADRSLFVQELLLSTLVREESSSSDEDDRGEMADFGAM
GCVDIMPLDVALENLNLKESNKGNEPPPPPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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