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Report for CCDS48198.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48198.1 Public Homo sapiens X GAB3 24 110 108 CCDS HistoryNCBI Gene:139716Re-query CCDS DB by CCDS ID:48198.1Re-query CCDS DB by GeneID:139716See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48198.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424127.3 ENSP00000399588.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000424127.3Link to Ensembl Protein Viewer:ENSP00000399588.2Re-query CCDS DB by Nucleotide ID:ENST00000424127Re-query CCDS DB by Protein ID:ENSP00000399588
Original member Current member NCBI NM_001081573.3 NP_001075042.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001081573.3Link to Protein Sequence:NP_001075042.1Re-query CCDS DB by Nucleotide ID:NM_001081573Re-query CCDS DB by Protein ID:NP_001075042Link to BLAST:NP_001075042.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001075042.1 587 Q8WWW8-2 587 100% 0 0

Chromosomal Locations for CCDS 48198.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 154678178 154678294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154680132 154680248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154695917 154696019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154697132 154697213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154699294 154699513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154700004 154700059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154712229 154712701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154713207 154713426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154716026 154716329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154750954 154751025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1764 nt):
ATGAGTGCGGGCGACGCAGTGTGCACCGGCTGGCTCGTTAAGTCGCCCCCCGAGAGGAAGCTACAGCGCT
ACGCCTGGCGCAAGCGCTGGTTTGTCCTCCGGCGAGGCCGCATGAGCGGCAACCCCGATGTCTTGGAGTA
CTACAGGAACAAGCACTCCAGCAAGCCCATCCGGGTGATAGACCTCAGCGAGTGTGCAGTGTGGAAGCAT
GTGGGCCCCAGCTTTGTTCGGAAGGAATTTCAGAATAATTTCGTGTTCATTGTCAAGACTACTTCCCGTA
CATTCTACCTGGTGGCCAAAACTGAGCAAGAAATGCAGGTGTGGGTGCACAGCATCAGTCAGGTCTGCAA
CCTTGGCCACCTGGAGGATGGTGCAGCAGATTCCATGGAGAGCCTCTCTTACACGCCCTCCTCCCTGCAG
CCATCCTCTGCCAGCTCCCTTCTTACCGCCCATGCTGCCAGCTCCTCTTTGCCAAGAGATGACCCAAACA
CTAATGCCGTAGCCACTGAGGAAACCAGAAGTGAGTCAGAGCTTCTCTTCCTTCCAGATTATCTGGTTTT
GTCCAACTGCGAGACTGGAAGACTGCACCATACCAGTCTACCCACCAGATGTGATAGCTGGTCAAACTCA
GACCGTTCATTGGAACAGGCTTCATTTGATGATGTTTTTGTTGACTGCCTGCAGCCGCTCCCCTCCAGTC
ATTTGGTCCACCCCTCATGCCATGGCAGTGGAGCTCAGGAGGTGCCATCCTCGAGGCCTCAGGCTGCCCT
GATCTGGAGTAGAGAAATCAATGGGCCACCCAGGGACCACTTGTCTTCTTCACCATTGCTGGAAAGTTCC
TTAAGTTCCACCATTCAGGTAGATAAAAATCAAGGTTCCTTACCCTGTGGAGCAAAAGAACTAGACATTA
TGTCCAACACTCCACCTCCCCGCCCCCCTAAGCCAAGCCATCTGTCTGAACGGCGCCAAGAGGAGTGGAG
TACACACAGTGGTAGCAAGAAGCCAGAATGCACTCTGGTTCCAAGAAGAATCTCCCTCTCTGGTTTAGAC
AACATGAGAACCTGGAAAGCTGATGTAGAAGGCCAATCCTTAAGACACCGAGACAAGCGGCTTAGTTTGA
ATTTGCCATGCAGGTTCTCCCCGATGTACCCCACAGCTTCAGCCAGTATCGAAGACAGCTATGTGCCCAT
GAGCCCCCAGGCTGGTGCCTCTGGTCTTGGACCCCACTGCAGCCCTGATGACTACATTCCAATGAACTCA
GGAAGCATCTCAAGCCCGTTGCCTGAGCTGCCTGCAAACCTGGAACCTCCCCCAGTGAATAGAGATCTCA
AGCCTCAGAGGAAATCACGGCCACCTCCTCTGGACCTGAGAAACCTCTCGATCATCCGGGAACATGCATC
TCTTACCAGGACCCGCACTGTGCCTTGCAGTCGAACCAGCTTTCTCTCTCCAGAAAGAAATGGTATTAAT
TCTGCAAGATTTTTTGCTAATCCTGTTTCCAGAGAAGACGAAGAAAGCTACATCGAAATGGAGGAGCACC
GAACAGCCAGTTCCCTGAGCAGTGGTGCCCTTACGTGGACAAAGAAATTCAGCCTAGATTATTTGGCCCT
GGACTTCAATTCAGCATCACCAGCCCCCATGCAGCAGAAACTTCTCCTTTCAGAAGAACAAAGAGTAGAC
TATGTCCAAGTGGATGAGCAGAAGACACAGGCTCTCCAGAGCACAAAACAGGAGTGGACGGATGAAAGGC
AATCCAAAGTATGA

Translation (587 aa):
MSAGDAVCTGWLVKSPPERKLQRYAWRKRWFVLRRGRMSGNPDVLEYYRNKHSSKPIRVIDLSECAVWKH
VGPSFVRKEFQNNFVFIVKTTSRTFYLVAKTEQEMQVWVHSISQVCNLGHLEDGAADSMESLSYTPSSLQ
PSSASSLLTAHAASSSLPRDDPNTNAVATEETRSESELLFLPDYLVLSNCETGRLHHTSLPTRCDSWSNS
DRSLEQASFDDVFVDCLQPLPSSHLVHPSCHGSGAQEVPSSRPQAALIWSREINGPPRDHLSSSPLLESS
LSSTIQVDKNQGSLPCGAKELDIMSNTPPPRPPKPSHLSERRQEEWSTHSGSKKPECTLVPRRISLSGLD
NMRTWKADVEGQSLRHRDKRLSLNLPCRFSPMYPTASASIEDSYVPMSPQAGASGLGPHCSPDDYIPMNS
GSISSPLPELPANLEPPPVNRDLKPQRKSRPPPLDLRNLSIIREHASLTRTRTVPCSRTSFLSPERNGIN
SARFFANPVSREDEESYIEMEEHRTASSLSSGALTWTKKFSLDYLALDFNSASPAPMQQKLLLSEEQRVD
YVQVDEQKTQALQSTKQEWTDERQSKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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