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Report for CCDS94104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94104.1 Public Homo sapiens 7 COBL 24 110 108 CCDS HistoryNCBI Gene:23242Re-query CCDS DB by CCDS ID:94104.1Re-query CCDS DB by GeneID:23242See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94104.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431948.6 ENSP00000413498.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431948.6Link to Ensembl Protein Viewer:ENSP00000413498.2Re-query CCDS DB by Nucleotide ID:ENST00000431948Re-query CCDS DB by Protein ID:ENSP00000413498
Current member NCBI NM_001410881.1 NP_001397810.1 Accepted alive Link to Nucleotide Sequence:NM_001410881.1Link to Protein Sequence:NP_001397810.1Re-query CCDS DB by Nucleotide ID:NM_001410881Re-query CCDS DB by Protein ID:NP_001397810Link to BLAST:NP_001397810.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397810.1 1343 O75128-2 1343 100% 0 0

Chromosomal Locations for CCDS 94104.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 51017551 51017568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51025109 51025372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51026546 51026665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51027712 51029591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51030812 51030909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51043383 51043692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51083058 51083228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51085166 51085304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51136158 51136331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51172456 51172530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51184102 51184199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51190850 51191078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51193379 51193589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51219741 51219944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 51316593 51316633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4032 nt):
ATGGACGCGCCGCGCGCCTCGGCGGCCAAGCCCCCGACCGGGAGGAAGATGAAGGCTCGTGCTCCCCCAC
CT
CCTGGAAAGGCTGCCACTCTGCATGTGCACAGTGACCAGAAGCCCCCCCACGATGGGGCCCTCGGGTC
G
CAGCAGAACTTGGTTCGCATGAAGGAGGCGCTGAGGGCCAGCACCATGGACGTCACCGTGGTCCTGCCT
AGT
GGGCTGGAGAAGAGGAGCGTGCTCAATGGGAGCCATGCGATGATGGACCTACTGGTTGAACTTTGCC
TT
CAGAACCACCTGAATCCATCCCACCATGCCCTTGAAATTCGGTCTTCAGAAACCCAACAACCTTTGAG
T
TTTAAGCCAAATACTTTGATTGGGACCCTGAATGTGCATACTGTGTTTCTGAAAGAAAAAGTTCCTGAA
GAG
AAGGTTAAGCCTGGTCCCCCTAAGGTGCCTGAGAAATCTGTGCGTTTGGTCGTGAATTACCTGCGGA
CA
CAAAAAGCTGTTGTGCGTGTGAGCCCTGAGGTTCCTCTCCAGAATATTCTCCCAGTCATTTGTGCAAA
G
TGTGAGGTCAGCCCAGAGCACGTGGTTCTCCTCAGGGACAACATTGCCGGAGAGGAGCTGGAGCTGTCC
AAG
TCCCTGAACGAGCTCGGGATAAAGGAGCTCTACGCGTGGGACAACAGAAGAGAAACCTTTAGGAAAT
CA
TCACTTGGCAATGATGAGACAGATAAAGAGAAGAAAAAATTTCTGGGATTTTTCAAAGTTAATAAAAG
A
AGCAATAGTAAGGCTGAGCAGCTCGTGCTGTCGGGTGCAGACAGCGATGAGGACACCTCCAGGGCTGCC
CCA
GGAAGGGGTTTGAACGGCTGTTTAACGACCCCCAACTCCCCATCCATGCACTCACGTTCTCTTACGC
TG
GGTCCATCCCTCTCGCTGGGCAGCATCTCAGGGGTGTCCGTGAAGTCGGAGATGAAGAAGCGCCGAGC
C
CCTCCTCCTCCAGGTTCAGGGCCACCTGTGCAAGACAAGGCATCGGAAAAGGTATCTCTTGGGTCACAG
ATT
GATTTACAGAAGAAGAAGCGGCGAGCGCCAGCTCCCCCTCCACCACAGCCACCACCACCGAGTCCCC
TG
ATCCCCAACCGCACTGAGGATAAGGAGGAGAACAGGAAGAGCACGATGGGTGGTGGACGGCAGGTGCC
A
CAAAAGCCTCCCAGAGGCACTGCTCGGGGTCCACCCCAGTTAGTGCTTCCCCCACCCCCGCCCTACCCT
CCT
CCCGACACAGACGTGGTGGAGCCTCTCAGCTTTCCCGGGGAAGGCGCTGGTTCCGAGGCCTCAGACC
CG
ATACCCAAACTAAGCCTGCCCCTGGGGTCTGGCAGCCACTGCAGCCCGGATGGAGCCCCGCAGGTGCT
G
TCAGAGGCGGAGGAGACCGTGTCAGTTGGCAGCTGTTTTGCGTCGGAGGACACGACCGAGGACTCAGGA
GTG
ATGAGTTCCCCCTCAGACATCGTCTCTCTGGACTCGCAGCAGGACAGCATGAAATACAAAGACAAGT
GG
GCCACAGACCAGGAAGACTGCAGTGACCAGGACCTCGCTGGAACCCCAGACCTGGGTCCCCAGAAGAG
C
CCCTTGTGGGAGAAGAATGGCTCTGAGAACTCACATCTGAGAACTGAAAAAGCTGTCACAGCCTCAAAT
GAT
GAAGAAGACCTATTAATTGCTGGAGAGTTCCGTAAAACCCTTGCAGAACTTGATGAAGACCTGGAAG
AA
ATGGAAGACAGCTATGAAACAGACACCAGCTCCCTCACCAGCTCCATCCATGGTGCATCCAACCACTG
C
CCACAGGATGCCATGATCCCTCACGGCGACACAGATGCAATCCCAGTAACATTCATAGGGGAAGTTTCA
GAT
GATCCTGTGGATTCGGGGTTGTTTTCCAATAGAAACAACAATGCTGGGTCTTTCGACTCGGAGGGTG
TT
GCCAGCAGGAGAGACTCCCTGGCGCCACTTCAAGCTGAGCACAGCCAGCCCCATGAAAAGGCAAGGGA
G
GAAGTACCTGCCCTGCACCCCGCTTCCCATGACGTCGGAAAAGGAATCCGTGTGGCCTTATCTAACATC
TCT
AAAGATGGGAATCTAATGGAAACGGCGCCCAGGGTGACTTCTTTTGCTTCGAATCTTCACACAGACA
AC
CTAAATGCAAAAGTGAAAGACAAAGTGTATGGCTGTGCTGACGGGGAGAGGACTCAAGCCACAGAGAG
A
GTGAATTCCCAACCGGTGAATGAAAAGGACAGCAACGATAAAAACGCTGCCTTGGCACCAACATCATGG
CAC
CAACGAGGCCAAAACCCAGGGAAAAGCTACAGACTTAAGCACGGCCTCACAACGTATAAAATCATTC
CT
CCAAAGTCAGAGATGCGATGTTACGACAGAGATGTGTCCCTCTCCACCGGAGCCATTAAGATTGACGA
G
CTGGGGAACTTGGTGAGTCCTCACGCCACCGGCATCAGGATCATTTCCCTGTCTTCGTCTGTGCCTGAA
GCA
GAATCTCAGCCCATTGGGAAAGTCAGAGAGTTCTGGAGGTGCAACTCTGTGGAAAAACACCTGGGCC
GA
CCCTCAGAGAGCTCTGCCAGGGGACCCCCCTCCACCCCTGTGCCCACGCAGACGCAGAATCCAGAGAG
C
AGACTCCAAGCAGACCCCAAGCCAATATCGCCCCAGCAGAAGTCTGCCCACCATGAGGGCCGGAACCCC
CTA
GGGGAGGGGAGAAACCAGCCCCCCACCATGGGCATGGGTCACGTGAGGGTGCCAGCAGCTCACACCA
CA
GAAGTCACATTTCTCAAGCCTCAGAGAAGAACGTCCAGCCAGTATGTGGCCTCTGCCATTGCCAAGCG
C
ATAGGAGCCCCAAAAGTCCATGCTGATGTGGTGAGGCCACACGGTTATGCCGAGAAGGGTTATGCAGGC
AAG
GCGCCAGTGCTGGCTGCACCACCTGTCACTGTGAAAGATGACAGGACATCCAGCCCACACTCAGAGA
CA
CAAGGATGGAAGGATGGTGCCCAGTGGCCCTGTGTCACTCCTCCCAACAACCACGGGGAAGATTTGGC
A
GTGGGAGCCCCTCCTAGGGGGGAGGTCATTGGCCCACACAGGAAGTTGTCTACTCAGGACAGACCTGCT
GCT
ATCCACAGAAGCTCCTGTTTCTCACTGGTTCAGTCTTCCCAGAGGGATCGTGTTTCTGTGGGACAGA
GC
TGTGGTTTCAGTGGAAAGCAAAGCACAAGTAGCCAGGAGGCCAGCTCAGCATCTGAGCCCAGACGCGC
A
CCTGATGGTACAGACCCACCCCCTCCACACACATCTGACACTCAGGCCTGCAGCAGGGAGCTGGTCAAT
GGC
TCTGTGCGCGCCCCAGGCCACGGCGAGCCTTCCCACCCTCCAGGAGGGTCTGGCACAGAAAGCCACA
TT
CTCCTAGAAAGAGAGGAAAAGCCCAGTGTGTTCTCTACAGATGGAAATGAAACAGACAGTATTTGGCC
A
CCCAGCATTTTTGGGCCGAAGAAAAAATTCAAACCTGTTGTCCAGAGACCAGTCCCAAAAGACACATCC
CTG
CACTCTGCCCTGATGGAAGCCATCCACTCTGCGGGAGGGAAGGACAGACTACGCAAGACGGCAGAAC
AC
ACCGGGGAGGGCAGGCCAGCGAAACTGTCCTACACGGAGGCAGAGGGCGAACGATCTGCACTGCTGGC
A
GCTATCCGCGGGCACAGCGGCACCTGCAGCCTGAGGAAGGTGGCATCCTCTGCTTCTGAGGAGCTCCAG
AGC
TTCCGAGATGCCGCACTCTCTGCTCAGGGCTCGGAAAGTCCTCTGCTAGAAGACCTTGGTCTTCTGT
CC
CCACCAGCCATTCCCCCACCACCCCCTCCACCCTCCCAGGCTCTCTCTGCACCAAGGACGGCCTCCAG
G
TTCAGCACGGGCACCCTCAGCAACACCGCAGACGCAAGGCAAGCCTTGATGGACGCCATCCGCTCCGGC
ACA
GGGGCTGCGAGACTGAGAAAGGTGCCCTTGCTCGTGTGA


Translation (1343 aa):
MDAPRASAAKPPTGRKMKARAPPPPGKAATLHVHSDQKPPHDGALGSQQNLVRMKEALRASTMDVTVVLP
S
GLEKRSVLNG
SHAMMDLLVELCLQNHLNPSHHALEIRSSETQQPLSFKPNTLIGTLNVHTVFLKEKVPE
E
KVKPGPPKVPE
KSVRLVVNYLRTQKAVVRVSPEVPLQNILPVICAKCEVSPEHVVLLRDNIAGEELELS
K
SLNELGIKELYAWDNRR
ETFRKSSLGNDETDKEKKKFLGFFKVNKRSNSKAEQLVLSGADSDEDTSRAA
P
GRGLN
GCLTTPNSPSMHSRSLTLGPSLSLGSISGVSVKSEMKKRRAPPPPGSGPPVQDKASEKVSLGSQ
I
DLQKKKRRAPAPPPPQPPPPSPLIPNRTEDKEENRKSTM
GGGRQVPQKPPRGTARGPPQLVLPPPPPYP
P
PDTDVVEPLSFPGEGAGSEASDPIPK
LSLPLGSGSHCSPDGAPQVLSEAEETVSVGSCFASEDTTEDSG
V
MSSPSDIVSLDSQQDSMKYKDKWATDQEDCSDQDLAGTPDLGPQKSPLWEKNGSENSHL
RTEKAVTASN
D
EEDLLIAGEFRKTLAELDEDLE
EMEDSYETDTSSLTSSIHGASNHCPQDAMIPHGDTDAIPVTFIGEVS
D
DPVDSGLFSNRNNNAGSFDSEGVASRRDSLAPLQAEHSQPHEKAREEVPALHPASHDVGKGIRVALSNI
S
KDGNLMETAPRVTSFASNLHTDNLNAKVKDKVYGCADGERTQATERVNSQPVNEKDSNDKNAALAPTSW
H
QRGQNPGKSYRLKHGLTTYKIIPPKSEMRCYDRDVSLSTGAIKIDELGNLVSPHATGIRIISLSSSVPE
A
ESQPIGKVREFWRCNSVEKHLGRPSESSARGPPSTPVPTQTQNPESRLQADPKPISPQQKSAHHEGRNP
L
GEGRNQPPTMGMGHVRVPAAHTTEVTFLKPQRRTSSQYVASAIAKRIGAPKVHADVVRPHGYAEKGYAG
K
APVLAAPPVTVKDDRTSSPHSETQGWKDGAQWPCVTPPNNHGEDLAVGAPPRGEVIGPHRKLSTQDRPA
A
IHRSSCFSLVQSSQRDRVSVGQSCGFSGKQSTSSQEASSASEPRRAPDGTDPPPPHTSDTQACSRELVN
G
SVRAPGHGEPSHPPGGSGTESHILLEREEKPSVFSTDGNETDSIWPPSIFGPKKKFKPVVQRPVPKDTS
L
HSALMEAIHSAGGKDRLRK
TAEHTGEGRPAKLSYTEAEGERSALLAAIRGHSGTCSLRKVASSASEELQ
S
FRDAALSAQGSESPLLEDLGLLSPPAIPPPPPPPSQALSAPRTASRFSTGTLSNTADARQALMDAIRSG
T
GAARLRK
VPLLV



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser