NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS58111.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58111.1 Public Homo sapiens 11 ZNF195 24 110 108 CCDS HistoryNCBI Gene:7748Re-query CCDS DB by CCDS ID:58111.1Re-query CCDS DB by GeneID:7748See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58111.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000438262.6 ENSP00000414353.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438262.6Link to Ensembl Protein Viewer:ENSP00000414353.2Re-query CCDS DB by Nucleotide ID:ENST00000438262Re-query CCDS DB by Protein ID:ENSP00000414353
Original member Current member EBI ENST00000528218.5 ENSP00000436384.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528218.5Link to Ensembl Protein Viewer:ENSP00000436384.1Re-query CCDS DB by Nucleotide ID:ENST00000528218Re-query CCDS DB by Protein ID:ENSP00000436384
Original member Current member EBI ENST00000618467.4 ENSP00000482411.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618467.4Link to Ensembl Protein Viewer:ENSP00000482411.1Re-query CCDS DB by Nucleotide ID:ENST00000618467Re-query CCDS DB by Protein ID:ENSP00000482411
Original member Current member NCBI NM_001256823.2 NP_001243752.1 Accepted alive Link to Nucleotide Sequence:NM_001256823.2Link to Protein Sequence:NP_001243752.1Re-query CCDS DB by Nucleotide ID:NM_001256823Re-query CCDS DB by Protein ID:NP_001243752Link to BLAST:NP_001243752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243752.1 90 O14628-8 90 100% 0 0

Chromosomal Locations for CCDS 58111.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 3362568 3362602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3370975 3371070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3371577 3371703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 3373577 3373591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGGCTGGTGCTCAGACTCTGTTGACGTTCAGGGATGTGGCCATAGAATTCTCCCTGGAGGAGTGGAAAT
GCCTGGACCTCGCTCAGCAGAATTTGTACAGGGATGTGATGTTGGAGAACTACAGAAACTTGTTCTCCGT
TGGTCTCACTGTCTGTAAGCCAGGCCTGATCACCTGCCTGGAGCAACGAAAAGAGCCCTGGAATGTGAAG
AGACAGGAGGCAGCAGACGGACATCCAGGTATTTTCTTTGTGGTTACCATGGAAATTATATAA

Translation (90 aa):
MAGAQTLLTFRDVAIEFSLEEWKCLDLAQQNLYRDVMLENYRNLFSVGLTVCKPGLITCLEQRKEPWNVK
RQEAADGHPGIFFVVTMEII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH