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Report for CCDS5451.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5451.1 Public Homo sapiens 7 GPR141 24 110 108 CCDS HistoryNCBI Gene:353345Re-query CCDS DB by CCDS ID:5451.1Re-query CCDS DB by GeneID:353345See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 5451.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334425.2 ENSP00000334540.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334425.2Link to Ensembl Protein Viewer:ENSP00000334540.1Re-query CCDS DB by Nucleotide ID:ENST00000334425Re-query CCDS DB by Protein ID:ENSP00000334540
Original member Current member EBI ENST00000447769.1 ENSP00000390410.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447769.1Link to Ensembl Protein Viewer:ENSP00000390410.1Re-query CCDS DB by Nucleotide ID:ENST00000447769Re-query CCDS DB by Protein ID:ENSP00000390410
Original member Current member NCBI NM_001329993.2 NP_001316922.1 Accepted alive Link to Nucleotide Sequence:NM_001329993.2Link to Protein Sequence:NP_001316922.1Re-query CCDS DB by Nucleotide ID:NM_001329993Re-query CCDS DB by Protein ID:NP_001316922Link to BLAST:NP_001316922.1
Original member Current member NCBI NM_001329994.2 NP_001316923.1 Accepted alive Link to Nucleotide Sequence:NM_001329994.2Link to Protein Sequence:NP_001316923.1Re-query CCDS DB by Nucleotide ID:NM_001329994Re-query CCDS DB by Protein ID:NP_001316923Link to BLAST:NP_001316923.1
Original member Current member NCBI NM_001381946.1 NP_001368875.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001381946.1Link to Protein Sequence:NP_001368875.1Re-query CCDS DB by Nucleotide ID:NM_001381946Re-query CCDS DB by Protein ID:NP_001368875Link to BLAST:NP_001368875.1
Original member Current member NCBI NM_181791.3 NP_861456.1 Accepted alive Link to Nucleotide Sequence:NM_181791.3Link to Protein Sequence:NP_861456.1Re-query CCDS DB by Nucleotide ID:NM_181791Re-query CCDS DB by Protein ID:NP_861456Link to BLAST:NP_861456.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316922.1 305 Q7Z602 305 100% 0 0
NP_001316923.1 305 Q7Z602 305 100% 0 0
NP_001368875.1 305 Q7Z602 305 100% 0 0
NP_861456.1 305 Q7Z602 305 100% 0 0

Chromosomal Locations for CCDS 5451.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 37740394 37741311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGCCTGGCCACAATACCTCCAGGAATTCCTCTTGCGATCCTATAGTGACACCCCACTTAATCAGCCTCT
ACTTCATAGTGCTTATTGGCGGGCTGGTGGGTGTCATTTCCATTCTTTTCCTCCTGGTGAAAATGAACAC
CCGGTCAGTGACCACCATGGCGGTCATTAACTTGGTGGTGGTCCACAGCGTTTTTCTGCTGACAGTGCCA
TTTCGCTTGACCTACCTCATCAAGAAGACTTGGATGTTTGGGCTGCCCTTCTGCAAATTTGTGAGTGCCA
TGCTGCACATCCACATGTACCTCACGTTCCTATTCTATGTGGTGATCCTGGTCACCAGATACCTCATCTT
CTTCAAGTGCAAAGACAAAGTGGAATTCTACAGAAAACTGCATGCTGTGGCTGCCAGTGCTGGCATGTGG
ACGCTGGTGATTGTCATTGTGGTACCCCTGGTTGTCTCCCGGTATGGAATCCATGAGGAATACAATGAGG
AGCACTGTTTTAAATTTCACAAAGAGCTTGCTTACACATATGTGAAAATCATCAACTATATGATAGTCAT
TTTTGTCATAGCCGTTGCTGTGATTCTGTTGGTCTTCCAGGTCTTCATCATTATGTTGATGGTGCAGAAG
CTACGCCACTCTTTACTATCCCACCAGGAGTTCTGGGCTCAGCTGAAAAACCTATTTTTTATAGGGGTCA
TCCTTGTTTGTTTCCTTCCCTACCAGTTCTTTAGGATCTATTACTTGAATGTTGTGACGCATTCCAATGC
CTGTAACAGCAAGGTTGCATTTTATAACGAAATCTTCTTGAGTGTAACAGCAATTAGCTGCTATGATTTG
CTTCTCTTTGTCTTTGGGGGAAGCCATTGGTTTAAGCAAAAGATAATTGGCTTATGGAATTGTGTTTTGT
GCCGTTAG

Translation (305 aa):
MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVGVISILFLLVKMNTRSVTTMAVINLVVVHSVFLLTVP
FRLTYLIKKTWMFGLPFCKFVSAMLHIHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMW
TLVIVIVVPLVVSRYGIHEEYNEEHCFKFHKELAYTYVKIINYMIVIFVIAVAVILLVFQVFIIMLMVQK
LRHSLLSHQEFWAQLKNLFFIGVILVCFLPYQFFRIYYLNVVTHSNACNSKVAFYNEIFLSVTAISCYDL
LLFVFGGSHWFKQKIIGLWNCVLCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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