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Report for CCDS12295.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12295.1 Public Homo sapiens 19 IER2 24 110 108 CCDS HistoryNCBI Gene:9592Re-query CCDS DB by CCDS ID:12295.1Re-query CCDS DB by GeneID:9592See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12295.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292433.4 ENSP00000292433.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292433.4Link to Ensembl Protein Viewer:ENSP00000292433.2Re-query CCDS DB by Nucleotide ID:ENST00000292433Re-query CCDS DB by Protein ID:ENSP00000292433
Original member Current member EBI ENST00000588173.1 ENSP00000465617.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000588173.1Link to Ensembl Protein Viewer:ENSP00000465617.1Re-query CCDS DB by Nucleotide ID:ENST00000588173Re-query CCDS DB by Protein ID:ENSP00000465617
Original member Current member EBI ENST00000587885.1 ENSP00000467294.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587885.1Link to Ensembl Protein Viewer:ENSP00000467294.1Re-query CCDS DB by Nucleotide ID:ENST00000587885Re-query CCDS DB by Protein ID:ENSP00000467294
Original member Current member NCBI NM_004907.3 NP_004898.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004907.3Link to Protein Sequence:NP_004898.2Re-query CCDS DB by Nucleotide ID:NM_004907Re-query CCDS DB by Protein ID:NP_004898Link to BLAST:NP_004898.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004898.2 223 Q9BTL4 223 100% 0 0

Chromosomal Locations for CCDS 12295.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13153187 13153858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGGAAGTGCAGAAAGAGGCACAGCGCATCATGACCCTGTCGGTGTGGAAGATGTATCACTCCCGCATGC
AGCGCGGTGGCCTGCGGCTGCACCGGAGTCTGCAGCTGTCGCTGGTCATGCGCAGCGCCCGGGAGCTCTA
CCTCTCGGCCAAGGTGGAGGCCCTCGAGCCCGAGGTGTCGTTGCCGGCCGCCCTCCCCTCTGACCCTCGC
CTGCACCCGCCCCGAGAAGCCGAGTCCACGGCCGAGACAGCGACCCCCGACGGTGAGCACCCGTTTCCGG
AGCCAATGGACACGCAGGAGGCGCCGACAGCCGAGGAGACCTCCGCCTGCTGTGCCCCGCGCCCCGCCAA
AGTCAGCCGCAAACGACGCAGCAGCAGCCTGAGCGACGGCGGGGACGCTGGACTGGTCCCGAGCAAGAAA
GCCCGTCTGGAAGAAAAGGAAGAAGAGGAGGGAGCGTCATCCGAAGTCGCCGATCGCCTGCAGCCCCCTC
CGGCGCAAGCGGAGGGCGCCTTTCCCAACCTGGCCCGCGTCCTGCAGAGGCGCTTCTCCGGCCTCCTGAA
CTGCAGCCCCGCGGCCCCTCCGACGGCGCCGCCCGCGTGCGAGGCAAAGCCCGCTTGCCGCCCGGCGGAC
AGCATGCTCAACGTGCTCGTGCGGGCCGTGGTGGCCTTCTGA

Translation (223 aa):
MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEALEPEVSLPAALPSDPR
LHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKK
ARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPAD
SMLNVLVRAVVAF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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