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Report for CCDS56452.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56452.1 Public Homo sapiens 6 MAP7 24 110 108 CCDS HistoryNCBI Gene:9053Re-query CCDS DB by CCDS ID:56452.1Re-query CCDS DB by GeneID:9053See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56452.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432797.6 ENSP00000414879.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000432797.6Link to Ensembl Protein Viewer:ENSP00000414879.2Re-query CCDS DB by Nucleotide ID:ENST00000432797Re-query CCDS DB by Protein ID:ENSP00000414879
Original member Current member EBI ENST00000611373.1 ENSP00000482998.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611373.1Link to Ensembl Protein Viewer:ENSP00000482998.1Re-query CCDS DB by Nucleotide ID:ENST00000611373Re-query CCDS DB by Protein ID:ENSP00000482998
Original member Current member NCBI NM_001198618.2 NP_001185547.1 Accepted alive Link to Nucleotide Sequence:NM_001198618.2Link to Protein Sequence:NP_001185547.1Re-query CCDS DB by Nucleotide ID:NM_001198618Re-query CCDS DB by Protein ID:NP_001185547Link to BLAST:NP_001185547.1
Original member Current member NCBI NM_001198619.2 NP_001185548.1 Accepted alive Link to Nucleotide Sequence:NM_001198619.2Link to Protein Sequence:NP_001185548.1Re-query CCDS DB by Nucleotide ID:NM_001198619Re-query CCDS DB by Protein ID:NP_001185548Link to BLAST:NP_001185548.1
Original member Current member NCBI NM_001388348.1 NP_001375277.1 Accepted alive Link to Nucleotide Sequence:NM_001388348.1Link to Protein Sequence:NP_001375277.1Re-query CCDS DB by Nucleotide ID:NM_001388348Re-query CCDS DB by Protein ID:NP_001375277Link to BLAST:NP_001375277.1
Original member Current member NCBI NM_001388349.1 NP_001375278.1 Accepted alive Link to Nucleotide Sequence:NM_001388349.1Link to Protein Sequence:NP_001375278.1Re-query CCDS DB by Nucleotide ID:NM_001388349Re-query CCDS DB by Protein ID:NP_001375278Link to BLAST:NP_001375278.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185547.1 603 Q14244-5 603 100% 0 0
NP_001185548.1 603 Q14244-5 603 100% 0 0
NP_001375277.1 603 Q14244-5 603 100% 0 0
NP_001375278.1 603 Q14244-5 603 100% 0 0

Chromosomal Locations for CCDS 56452.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 136344228 136344238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136345856 136346079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136356692 136356794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136359820 136359877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136359981 136360031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136360697 136360798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136361005 136361179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136362450 136362702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136365735 136366018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136366327 136366439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136372501 136372625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136377755 136377868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136383671 136383781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 136388393 136388480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGGAAAGGAGCCAGAAGCCAAAACAGAAGCATAACCGTTGGTCGTGGGGAGGCTCTCTCCATGGGAGCC
CTAGCATCCACAGTGCAGATCCAGACAGGCGGTCAGTTTCCACCATGAATCTTTCGAAATATGTTGATCC
CGTCATTAGCAAGCGGCTCTCCTCTTCATCTGCAACTTTACTAAATTCTCCAGATAGAGCTCGCCGCCTG
CAGCTCAGCCCATGGGAGAGCAGCGTTGTTAACAGACTCCTGACGCCCACACATTCGTTCCTGGCCAGAA
GTAAAAGCACAGCTGCCTTGTCTGGAGAAGCAGCATCTTGCAGCCCCATCATCATGCCCTACAAAGCTGC
ACACTCTAGAAATTCGATGGATCGACCAAAACTCTTTGTAACACCACCTGAGGGCTCTTCTCGCAGGAGG
ATCATTCATGGCACAGCGAGCTATAAAAAAGAAAGAGAGAGAGAAAATGTACTCTTCCTCACATCTGGCA
CCCGAAGGGCTGTATCTCCATCTAATCCCAAAGCAAGACAACCAGCTCGCTCCCGACTTTGGCTTCCGTC
CAAGTCTCTTCCTCATTTGCCTGGCACACCCAGACCGACATCCTCCTTGCCACCCGGCTCAGTCAAAGCT
GCTCCTGCTCAGGTCCGGCCCCCATCCCCCGGCAACATCCGCCCTGTCAAGAGGGAAGTCAAAGTGGAGC
CTGAGAAGAAAGATCCTGAGAAGGAACCTCAGAAAGTTGCCAATGAGCCCTCACTAAAGGGCAGAGCACC
TTTAGTGAAGGTAGAAGAAGCCACAGTTGAAGAGCGGACACCTGCTGAACCAGAAGTTGGCCCTGCTGCT
CCAGCCATGGCCCCAGCTCCAGCCTCGGCCCCAGCTCCAGCCTCGGCCCCAGCTCCAGCCCCGGTCCCCA
CCCCAGCCATGGTCTCAGCCCCGTCATCCACTGTGAATGCCAGTGCTTCTGTTAAGACTTCTGCAGGCAC
CACCGACCCAGAGGAGGCCACAAGGCTTCTAGCTGAGAAGAGGCGGCTGGCCCGAGAGCAGAGAGAAAAG
GAAGAAAGGGAGAGGAGGGAGCAGGAAGAGCTTGAAAGACAAAAGAGAGAGGAATTGGCTCAACGTGTGG
CTGAAGAGAGGACGACTCGCCGTGAGGAGGAGTCGCGCAGGCTGGAAGCCGAGCAGGCCCGGGAGAAGGA
GGAGCAGCTGCAGCGGCAGGCGGAGGAGCGGGCGCTGCGCGAGCGGGAGGAGGCAGAGCGCGCCCAGAGG
CAGAAAGAAGAAGAAGCTCGCGTTCGTGAAGAAGCAGAGAGGGTCCGGCAGGAACGAGAGAAGCATTTCC
AGAGAGAAGAGCAAGAGCGCCTGGAGAGAAAGAAGCGACTTGAGGAGATTATGAAAAGAACCAGGAGAAC
AGAAGCTACAGATAAGAAAACCAGTGATCAGAGAAACGGTGATATAGCCAAGGGAGCTCTCACTGGAGGA
ACAGAGGTGTCTGCACTTCCATGTACAACAAACGCTCCGGGAAATGGAAAGCCAGTTGGCAGCCCACATG
TGGTTACCTCACACCAGTCAAAAGTGACAGTGGAGAGCACTCCCGATTTGGAAAAACAACCAAATGAAAA
TGGTGTATCTGTTCAGAATGAAAATTTTGAAGAAATTATAAACTTACCCATTGGATCTAAACCATCCAGA
TTAGATGTCACCAACAGTGAGAGCCCAGAAATTCCTTTGAATCCAATTTTGGCCTTTGATGATGAAGGGA
CACTTGGGCCCCTGCCTCAGGTAGATGGTGTTCAGACACAGCAGACTGCAGAAGTTATATGA

Translation (603 aa):
MERSQKPKQKHNRWSWGGSLHGSPSIHSADPDRRSVSTMNLSKYVDPVISKRLSSSSATLLNSPDRARRL
QLSPWESSVVNRLLTPTHSFLARSKSTAALSGEAASCSPIIMPYKAAHSRNSMDRPKLFVTPPEGSSRRR
IIHGTASYKKERERENVLFLTSGTRRAVSPSNPKARQPARSRLWLPSKSLPHLPGTPRPTSSLPPGSVKA
APAQVRPPSPGNIRPVKREVKVEPEKKDPEKEPQKVANEPSLKGRAPLVKVEEATVEERTPAEPEVGPAA
PAMAPAPASAPAPASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDPEEATRLLAEKRRLAREQREK
EERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQRQAEERALREREEAERAQR
QKEEEARVREEAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEATDKKTSDQRNGDIAKGALTGG
TEVSALPCTTNAPGNGKPVGSPHVVTSHQSKVTVESTPDLEKQPNENGVSVQNENFEEIINLPIGSKPSR
LDVTNSESPEIPLNPILAFDDEGTLGPLPQVDGVQTQQTAEVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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