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Report for CCDS5435.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
5435.2 |
Public |
Homo sapiens |
7 |
ITPRID1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:223075](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:5435.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:223075](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 5435.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000407970.7 |
ENSP00000384416.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000407970.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000384416.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000407970](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000384416](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000615280.5 |
ENSP00000478518.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000615280.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000478518.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000615280](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000478518](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001257967.3 |
NP_001244896.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001257967.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001244896.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001257967](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001244896](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001244896.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_194300.5 |
NP_919276.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_194300.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_919276.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_194300](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_919276](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_919276.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 5435.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3135 nt): ATGATGGCACAGAAATCACAAGGATCTGACAACCTTCAGGAAGGCCAGGAAAAGAGCAAGAGAGAGATCC TGAAGTGCACCAAAAGCGCGTGGGCTCCGCTGGATGAGTGGCTGCCCCCTGACCCTGAGGAGGAAAGCCA GAGTCTCACCATCCCCATGCTGGAAGATTCCAAGCAAGAAAGTATTCAGCAGTGGCTGGACTCTGGATTC TTTGTCTCTGCAAATGAAAACTTTCAACAAGTCATTGACCGCACTGTTTCTTTGTATGAACAAGGGATGG TTCAAATGACTGTGAAAGACTACATGAGATCTTTGCATCAGTTTTCAGAAACTCCCATCCTATCCAGAGG GACCAGTTTCAACTCTTGCTATTCTACTGCAAGTGTACCACAAAGCATTCCTGAATGGCTGGAATTTTGG GAGATAGATCCAGTGGAGATTCTCTTGGATCTGGGGTTTGGTGCTGATGAGCCAGACATCTGCATGCAAA TCCCAGCCAGATTCCTTGGTTGTGGCTCAGCAGCCAGAGGAATCAACATCCGTGTTTTTCTTGAAGCTCA AAAGCAGCGAATGGACATTGAGAACCCCAACTTGTACGGTCGTTTCCGACAGCTGGAAATCCTGGACCAT GTGACCAATGCCTTCTCATCTCTGCTGAGTGATGTCAGCATCCTGCCAAACAGAGCTGAAGAGAAAGCTG GAGGAGAGAGTGTGCAAAGAACCTCAGTGAGTGCCGCCAAAGAGCATCGAAGAAGAATGGGTAAACTCTT AAGGAGAGCTTCCAAACAGAACATCAGGCGGGATTGTAACCCAGAGGTATCAGAGTCCTTCAAGGTGAAG GATGAAGTTTTTGTTCCCTTTACAAAACCATGGGATTGTGGAGCAGAGCTAGCAGCAACCTCAATCAACC ACAAGCAAAATCATTTGTCTCTGTCAGTAGAACATCAGTCTCTCCAAGCCTGTGATGATTTGCTACCTTA TCCTCCTCATGGTCTTCTGAGCAAGCAGTGGCCTTGCTCATCTATGCCGGCCAAGCAGGCTCCTCCTTCC TGTGTGTCTGAGGGGTCAGTCAAGGGCAGAACTCAGAAGGAGAACTTATTTCAGACTAACAAGCTCAAGA GCTTGTCTCATCTTGCAGGCAAAGGACCAGACTCATTTGAAATGGAAGAGGTCCAAAGCTTTGAAGAAGA GACTGGTAATCCTCTTGACATGACTTCAGGAACTGTAGGTGCCAGGGTGGACAGAGCAAATAGCTGCCAG TCTGACAGCAGCGGGTTCCTGGAGGAGCCGCTGGAACCGCTGCCCCTCCAGATGCCTTCCTTGCCAAACA GCCAGAGTCCTGCTGAGAATGGAGGTAGAAAGCCAAGAGATCAGAGCCACAGCTTAGTATCATCCCAGGA CTGTCAGCTAGAGTCGGATGGGCCAGATTCCAAAAGTAGGGCGAGCATGTCTTTTTCAAGCCAAGAAGCG AATGCCTTGGAACAAAGGGCCTCAGTATCTGTGATGGAGGAAGAGTTTCTGCTTGAGGCCATGGAGGGGC CACCAGAGCTGTATATCCCAGACATGGCCTGTGCCAAGACCACCACGAGGGGAGAATGCCCAAGGAAAGA CAGCCATCTGTGGCAGCTTCTGCCAATGCCCCATGCTGAGTATGAGGTCACCAGACCCACAGCCACTTCC AAATATGATCATCCTCTGGGGTTTATGGTAACCCACGTCACAGAAATGCAGGACAGTTTTGTGAGGCCTG AGGGAGCTGGCAAAGTGCAAAGCCACCACAATGAGTCTCAAAGGTCACCTGGAAATGATCATACTCAAGA CAAGTTCCTTCATGTTGACTCTGAGGCCCCACGAGAAGAGGAAAGCAGTGGATTCTGTCCTCACACCAAC CACAGCTTACTCGTACCAGAAAGCTCATCACAGTGTATCCCCAAGCACAGTGAAATCACACCTTATGCAA CTGACCTTGCTCAAACATCTGAAAAGCTCATTCCCCACCTCCATAAACTGCCTGGAGATCCTGCCCAGGT GAAGTCAAGGTCTGGTACTTTGGGTCAGATACTACCTGGGACAGAAGCTGAGATGGAAAACCTTCCTCTA AATACTGGCAGCTCCAGGTCTGTAATGACCCAGATGTCCTCCAGCCTGGTGTCGGCTGCTCAGAGGGCTG TGGCCTTGGGGACTGGTCCCAGAGGAACATCTTTAGAATGCACTGTGTGTGATCCTGTTACCGCAACAGA AACAAGACTGGGGACAAAAGCAAGACAGTTAAATGATGCTTCCATTCAGACTTCAGCTCTAAGCAACAAG ACCTTGACACATGGGCCCCAGCCCCTCACCAAATCCGTCTCTCTAGACTCAGGCTTCTCTAGTATCTGCC CAATGGGCACCTGCCATGCTATACCTGCCCACTGCTGCATCTGCTGTCATCACCACCCTCACTGCCACGG GGAGAGGCAAAGCCCTGGCCCTGAACCCTCAGTCTGTAGGCACTGCCTGTGTTCACTAACTGGTCACCAG GAAGCCCAGTTCATGACGACTTTGAAAGCCCTTCAGGACACTACAGTGAGGGAGCTATGTTCCTGCACAG TCCATGAGATGGAAGCCATGAAGACGATATGCCAAAGTTTCCGGGAGTATTTAGAAGAAATTGAACAGCA CCTTATGGGACAGCAGGCCCTCTTTTCCAGGGACATGTCAGAGGAGGAAAGGGAGGAGGCCGAGCAACTG CAAACGTTACGTGAGGCCCTGAGGCAGCAGGTGGCAGAGTTGGAATTTCAGTTAGGAGACCGGGCTCAGC AAATCAGAGAAGGGATTTTACTGCAGCTGGAGGTTCTCACAGCAGAGCCACCTGAACACTATTCAAATCT GCATCAATATAACTGGATAGAAGAAAGCAATGGGCAGACTTCATGTTCTAAAATCCACCCAGGCATGGCC CCGAGGACTGTGTTTCCTCCCGATGATGGCCAGGAGGCTCCCTGTTCAGGTGGGACCCAGTTGGCTGCCT TCACTCCACCCACCTTGGAGAACAGCACCAGGATGTCTCCTTCATCATCAGCTTGGGCAAAGTTAGGTCC AACCCCTTTGTCAAATTGTCCTGTTGGAGAAAAGGATGCAGATGTCTTCCTCTAG
Translation (1044 aa): MMAQKSQGSDNLQEGQEKSKREILKCTKSAWAPLDEWLPPDPEEESQSLTIPMLEDSKQESIQQWLDSGF FVSANENFQQVIDRTVSLYEQGMVQMTVKDYMRSLHQFSETPILSRGTSFNSCYSTASVPQSIPEWLEFW EIDPVEILLDLGFGADEPDICMQIPARFLGCGSAARGINIRVFLEAQKQRMDIENPNLYGRFRQLEILDH VTNAFSSLLSDVSILPNRAEEKAGGESVQRTSVSAAKEHRRRMGKLLRRASKQNIRRDCNPEVSESFKVK DEVFVPFTKPWDCGAELAATSINHKQNHLSLSVEHQSLQACDDLLPYPPHGLLSKQWPCSSMPAKQAPPS CVSEGSVKGRTQKENLFQTNKLKSLSHLAGKGPDSFEMEEVQSFEEETGNPLDMTSGTVGARVDRANSCQ SDSSGFLEEPLEPLPLQMPSLPNSQSPAENGGRKPRDQSHSLVSSQDCQLESDGPDSKSRASMSFSSQEA NALEQRASVSVMEEEFLLEAMEGPPELYIPDMACAKTTTRGECPRKDSHLWQLLPMPHAEYEVTRPTATS KYDHPLGFMVTHVTEMQDSFVRPEGAGKVQSHHNESQRSPGNDHTQDKFLHVDSEAPREEESSGFCPHTN HSLLVPESSSQCIPKHSEITPYATDLAQTSEKLIPHLHKLPGDPAQVKSRSGTLGQILPGTEAEMENLPL NTGSSRSVMTQMSSSLVSAAQRAVALGTGPRGTSLECTVCDPVTATETRLGTKARQLNDASIQTSALSNK TLTHGPQPLTKSVSLDSGFSSICPMGTCHAIPAHCCICCHHHPHCHGERQSPGPEPSVCRHCLCSLTGHQ EAQFMTTLKALQDTTVRELCSCTVHEMEAMKTICQSFREYLEEIEQHLMGQQALFSRDMSEEEREEAEQL QTLREALRQQVAELEFQLGDRAQQIREGILLQLEVLTAEPPEHYSNLHQYNWIEESNGQTSCSKIHPGMA PRTVFPPDDGQEAPCSGGTQLAAFTPPTLENSTRMSPSSSAWAKLGPTPLSNCPVGEKDADVFL
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