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Report for CCDS14156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14156.1 Public Homo sapiens X RAB9A 24 110 108 CCDS HistoryNCBI Gene:9367Re-query CCDS DB by CCDS ID:14156.1Re-query CCDS DB by GeneID:9367See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14156.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000464506.2 ENSP00000420127.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000464506.2Link to Ensembl Protein Viewer:ENSP00000420127.1Re-query CCDS DB by Nucleotide ID:ENST00000464506Re-query CCDS DB by Protein ID:ENSP00000420127
Original member Current member EBI ENST00000618931.2 ENSP00000480777.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618931.2Link to Ensembl Protein Viewer:ENSP00000480777.1Re-query CCDS DB by Nucleotide ID:ENST00000618931Re-query CCDS DB by Protein ID:ENSP00000480777
Original member Current member NCBI NM_001195328.2 NP_001182257.1 Accepted alive Link to Nucleotide Sequence:NM_001195328.2Link to Protein Sequence:NP_001182257.1Re-query CCDS DB by Nucleotide ID:NM_001195328Re-query CCDS DB by Protein ID:NP_001182257Link to BLAST:NP_001182257.1
Original member Current member NCBI NM_004251.5 NP_004242.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004251.5Link to Protein Sequence:NP_004242.1Re-query CCDS DB by Nucleotide ID:NM_004251Re-query CCDS DB by Protein ID:NP_004242Link to BLAST:NP_004242.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182257.1 201 P51151 201 100% 0 0
NP_004242.1 201 P51151 201 100% 0 0

Chromosomal Locations for CCDS 14156.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 13708747 13709352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCAGGAAAATCATCACTTTTTAAAGTAATTCTCCTTGGAGATGGTGGAGTTGGGAAGAGTTCACTTA
TGAACAGATATGTAACTAATAAGTTTGATACCCAGCTCTTCCATACAATAGGTGTGGAATTTTTAAATAA
AGATTTGGAAGTGGATGGACATTTTGTTACCATGCAGATTTGGGACACGGCAGGTCAGGAGCGATTCCGA
AGCCTGAGGACACCATTTTACAGAGGTTCTGACTGCTGCCTGCTTACTTTTAGTGTCGATGATTCACAAA
GCTTCCAGAACTTAAGTAACTGGAAGAAAGAATTCATATATTATGCAGATGTGAAAGAGCCTGAGAGCTT
TCCTTTTGTGATTCTGGGTAACAAGATTGACATAAGCGAACGGCAGGTGTCTACAGAAGAAGCCCAAGCT
TGGTGCAGGGACAACGGCGACTATCCTTATTTTGAAACAAGTGCAAAAGATGCCACAAATGTGGCAGCAG
CCTTTGAGGAAGCGGTTCGAAGAGTTCTTGCTACCGAGGATAGGTCAGATCATTTGATTCAGACAGACAC
AGTCAATCTTCACCGAAAGCCCAAGCCTAGCTCATCTTGCTGTTGA

Translation (201 aa):
MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFR
SLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDISERQVSTEEAQA
WCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSDHLIQTDTVNLHRKPKPSSSCC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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