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Report for CCDS86612.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86612.1 Public Homo sapiens 17 GOSR2 24 110 108 CCDS HistoryNCBI Gene:9570Re-query CCDS DB by CCDS ID:86612.1Re-query CCDS DB by GeneID:9570See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86612.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000638216.1 ENSP00000491961.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638216.1Link to Ensembl Protein Viewer:ENSP00000491961.1Re-query CCDS DB by Nucleotide ID:ENST00000638216Re-query CCDS DB by Protein ID:ENSP00000491961
Original member Current member EBI ENST00000640443.1 ENSP00000492548.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000640443.1Link to Ensembl Protein Viewer:ENSP00000492548.1Re-query CCDS DB by Nucleotide ID:ENST00000640443Re-query CCDS DB by Protein ID:ENSP00000492548
Original member Current member NCBI NM_001363851.2 NP_001350780.1 Accepted alive Link to Nucleotide Sequence:NM_001363851.2Link to Protein Sequence:NP_001350780.1Re-query CCDS DB by Nucleotide ID:NM_001363851Re-query CCDS DB by Protein ID:NP_001350780Link to BLAST:NP_001350780.1

Chromosomal Locations for CCDS 86612.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46929545 46929584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46931099 46931207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46932067 46932199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46935029 46935169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46938599 46938760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGGGACGCCTGGAGACGGCAGACAAGCAGTCTGTGCACATAGTAGAAAACGAAATCCAAGCAAGCATAG
ACCAGATATTCAGCCGTCTAGAACGTCTGGAGATTTTGTCCAGCAAGGAGCCCCCTAACAAAAGGCAAAA
TGCCAGACTTCGGGTTGACCAGTTAAAGTATGATGTCCAGCACCTGCAGACTGCGCTCAGAAACTTCCAG
CATCGGCGCCATGCAAGGGAGCAGCAGGAGAGACAGCGAGAAGAGCTTCTGTCTCGAACCTTCACCACTA
ACGACTCTGACACCACCATACCAATGGACGAATCACTGCAGTTTAACTCCTCCCTCCAGAAAGTTCACAA
CGGCATGGATGACCTCATTTTAGATGGGCACAATATTTTAGATGGACTGAGGACCCAGAGACTGACCTTG
AAGGGGACTCAGAAGAAGATCCTTGACATTGCCAACATGCTGGGCTTGTCCAACACAGTGATGCGGCTCA
TCGAGAAGCGGGCTTTCCAGGACAAGTACTTTATGATAGGTGGGATGCTGCTGACCTGTGTGGTCATGTT
CCTCGTGGTGCAGTACCTGACATGA

Translation (194 aa):
MGRLETADKQSVHIVENEIQASIDQIFSRLERLEILSSKEPPNKRQNARLRVDQLKYDVQHLQTALRNFQ
HRRHAREQQERQREELLSRTFTTNDSDTTIPMDESLQFNSSLQKVHNGMDDLILDGHNILDGLRTQRLTL
KGTQKKILDIANMLGLSNTVMRLIEKRAFQDKYFMIGGMLLTCVVMFLVVQYLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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