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Report for CCDS2711.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2711.1 Public Homo sapiens 3 ABHD5 24 110 108 CCDS HistoryNCBI Gene:51099Re-query CCDS DB by CCDS ID:2711.1Re-query CCDS DB by GeneID:51099See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2711.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000644371.2 ENSP00000495778.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000644371.2Link to Ensembl Protein Viewer:ENSP00000495778.1Re-query CCDS DB by Nucleotide ID:ENST00000644371Re-query CCDS DB by Protein ID:ENSP00000495778
Original member Current member EBI ENST00000649763.1 ENSP00000497701.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649763.1Link to Ensembl Protein Viewer:ENSP00000497701.1Re-query CCDS DB by Nucleotide ID:ENST00000649763Re-query CCDS DB by Protein ID:ENSP00000497701
Original member Current member NCBI NM_001355186.2 NP_001342115.1 Accepted alive Link to Nucleotide Sequence:NM_001355186.2Link to Protein Sequence:NP_001342115.1Re-query CCDS DB by Nucleotide ID:NM_001355186Re-query CCDS DB by Protein ID:NP_001342115Link to BLAST:NP_001342115.1
Original member Current member NCBI NM_016006.6 NP_057090.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016006.6Link to Protein Sequence:NP_057090.2Re-query CCDS DB by Nucleotide ID:NM_016006Re-query CCDS DB by Protein ID:NP_057090Link to BLAST:NP_057090.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001342115.1 349 Q8WTS1 349 100% 0 0
NP_057090.2 349 Q8WTS1 349 100% 0 0

Chromosomal Locations for CCDS 2711.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 43690993 43691039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43699276 43699361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43702215 43702587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43711709 43711863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43714947 43715058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43717671 43717857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 43718443 43718532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGCGGCGGAGGAGGAGGAGGTGGACTCTGCCGACACCGGAGAGAGGTCAGGATGGCTAACTGGTTGGC
TCCCCACATGGTGCCCTACGTCTATATCACACCTTAAAGAAGCTGAAGAGAAGATGTTAAAATGTGTGCC
TTGCACATACAAAAAAGAACCTGTTCGTATATCTAATGGAAATAAAATATGGACACTGAAGTTCTCTCAT
AATATTTCAAATAAGACTCCACTTGTCCTTCTCCATGGTTTTGGAGGAGGTCTTGGGCTCTGGGCACTGA
ATTTTGGAGATCTTTGCACCAACAGACCTGTCTATGCTTTTGACCTATTGGGTTTTGGACGAAGTAGTAG
ACCCAGGTTTGACAGTGATGCAGAAGAAGTGGAGAATCAGTTTGTGGAATCCATTGAAGAGTGGAGATGT
GCCCTAGGATTGGACAAAATGATCTTGCTTGGGCACAACCTAGGTGGATTCTTGGCTGCTGCTTACTCGC
TGAAGTACCCATCAAGGGTTAATCATCTCATTTTAGTGGAGCCTTGGGGTTTCCCTGAACGACCAGACCT
TGCTGATCAAGACAGACCAATTCCAGTTTGGATCAGAGCCTTGGGAGCAGCATTGACTCCCTTTAACCCT
TTAGCTGGCCTAAGGATTGCAGGACCCTTTGGTTTAAGTCTAGTGCAGCGTTTAAGGCCTGATTTCAAAC
GAAAGTATTCTTCAATGTTCGAAGACGATACTGTGACAGAATACATCTACCACTGTAATGTGCAGACTCC
AAGTGGTGAGACAGCTTTCAAGAATATGACTATTCCTTATGGATGGGCAAAAAGGCCAATGCTCCAGCGA
ATTGGTAAAATGCACCCTGACATTCCAGTTTCAGTGATCTTTGGCGCCCGATCCTGCATAGATGGCAATT
CTGGCACCAGCATCCAGTCCTTACGACCACATTCATATGTGAAGACAATAGCTATTCTTGGGGCAGGACA
TTATGTATATGCAGATCAACCAGAAGAATTCAACCAGAAAGTAAAGGAGATCTGCGACACTGTGGACTGA

Translation (349 aa):
MAAEEEEVDSADTGERSGWLTGWLPTWCPTSISHLKEAEEKMLKCVPCTYKKEPVRISNGNKIWTLKFSH
NISNKTPLVLLHGFGGGLGLWALNFGDLCTNRPVYAFDLLGFGRSSRPRFDSDAEEVENQFVESIEEWRC
ALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWGFPERPDLADQDRPIPVWIRALGAALTPFNP
LAGLRIAGPFGLSLVQRLRPDFKRKYSSMFEDDTVTEYIYHCNVQTPSGETAFKNMTIPYGWAKRPMLQR
IGKMHPDIPVSVIFGARSCIDGNSGTSIQSLRPHSYVKTIAILGAGHYVYADQPEEFNQKVKEICDTVD


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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