NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3571.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3571.1 Public Homo sapiens 4 G3BP2 24 110 108 CCDS HistoryNCBI Gene:9908Re-query CCDS DB by CCDS ID:3571.1Re-query CCDS DB by GeneID:9908See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3571.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359707.9 ENSP00000352738.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359707.9Link to Ensembl Protein Viewer:ENSP00000352738.4Re-query CCDS DB by Nucleotide ID:ENST00000359707Re-query CCDS DB by Protein ID:ENSP00000352738
Original member Current member EBI ENST00000395719.7 ENSP00000379069.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395719.7Link to Ensembl Protein Viewer:ENSP00000379069.3Re-query CCDS DB by Nucleotide ID:ENST00000395719Re-query CCDS DB by Protein ID:ENSP00000379069
Original member Current member EBI ENST00000677606.1 ENSP00000503228.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677606.1Link to Ensembl Protein Viewer:ENSP00000503228.1Re-query CCDS DB by Nucleotide ID:ENST00000677606Re-query CCDS DB by Protein ID:ENSP00000503228
Original member Current member EBI ENST00000678062.1 ENSP00000503239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678062.1Link to Ensembl Protein Viewer:ENSP00000503239.1Re-query CCDS DB by Nucleotide ID:ENST00000678062Re-query CCDS DB by Protein ID:ENSP00000503239
Original member Current member EBI ENST00000677333.1 ENSP00000503355.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677333.1Link to Ensembl Protein Viewer:ENSP00000503355.1Re-query CCDS DB by Nucleotide ID:ENST00000677333Re-query CCDS DB by Protein ID:ENSP00000503355
Original member Current member EBI ENST00000678123.1 ENSP00000503504.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678123.1Link to Ensembl Protein Viewer:ENSP00000503504.1Re-query CCDS DB by Nucleotide ID:ENST00000678123Re-query CCDS DB by Protein ID:ENSP00000503504
Original member Current member EBI ENST00000676974.1 ENSP00000503669.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676974.1Link to Ensembl Protein Viewer:ENSP00000503669.1Re-query CCDS DB by Nucleotide ID:ENST00000676974Re-query CCDS DB by Protein ID:ENSP00000503669
Original member Current member EBI ENST00000677171.1 ENSP00000503911.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677171.1Link to Ensembl Protein Viewer:ENSP00000503911.1Re-query CCDS DB by Nucleotide ID:ENST00000677171Re-query CCDS DB by Protein ID:ENSP00000503911
Original member Current member EBI ENST00000678578.1 ENSP00000503943.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678578.1Link to Ensembl Protein Viewer:ENSP00000503943.1Re-query CCDS DB by Nucleotide ID:ENST00000678578Re-query CCDS DB by Protein ID:ENSP00000503943
Original member Current member EBI ENST00000677162.1 ENSP00000504101.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677162.1Link to Ensembl Protein Viewer:ENSP00000504101.1Re-query CCDS DB by Nucleotide ID:ENST00000677162Re-query CCDS DB by Protein ID:ENSP00000504101
Original member Current member EBI ENST00000678265.1 ENSP00000504159.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678265.1Link to Ensembl Protein Viewer:ENSP00000504159.1Re-query CCDS DB by Nucleotide ID:ENST00000678265Re-query CCDS DB by Protein ID:ENSP00000504159
Original member Current member EBI ENST00000677620.1 ENSP00000504316.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677620.1Link to Ensembl Protein Viewer:ENSP00000504316.1Re-query CCDS DB by Nucleotide ID:ENST00000677620Re-query CCDS DB by Protein ID:ENSP00000504316
Original member Current member EBI ENST00000677566.1 ENSP00000504361.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677566.1Link to Ensembl Protein Viewer:ENSP00000504361.1Re-query CCDS DB by Nucleotide ID:ENST00000677566Re-query CCDS DB by Protein ID:ENSP00000504361
Original member Current member EBI ENST00000678971.1 ENSP00000504371.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678971.1Link to Ensembl Protein Viewer:ENSP00000504371.1Re-query CCDS DB by Nucleotide ID:ENST00000678971Re-query CCDS DB by Protein ID:ENSP00000504371
Original member Current member EBI ENST00000676584.1 ENSP00000504496.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676584.1Link to Ensembl Protein Viewer:ENSP00000504496.1Re-query CCDS DB by Nucleotide ID:ENST00000676584Re-query CCDS DB by Protein ID:ENSP00000504496
Original member Current member EBI ENST00000677201.1 ENSP00000504523.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677201.1Link to Ensembl Protein Viewer:ENSP00000504523.1Re-query CCDS DB by Nucleotide ID:ENST00000677201Re-query CCDS DB by Protein ID:ENSP00000504523
Original member Current member EBI ENST00000678798.1 ENSP00000504585.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678798.1Link to Ensembl Protein Viewer:ENSP00000504585.1Re-query CCDS DB by Nucleotide ID:ENST00000678798Re-query CCDS DB by Protein ID:ENSP00000504585
Original member Current member EBI ENST00000678100.1 ENSP00000504698.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000678100.1Link to Ensembl Protein Viewer:ENSP00000504698.1Re-query CCDS DB by Nucleotide ID:ENST00000678100Re-query CCDS DB by Protein ID:ENSP00000504698
Original member Current member NCBI NM_001400004.1 NP_001386933.1 Accepted alive Link to Nucleotide Sequence:NM_001400004.1Link to Protein Sequence:NP_001386933.1Re-query CCDS DB by Nucleotide ID:NM_001400004Re-query CCDS DB by Protein ID:NP_001386933Link to BLAST:NP_001386933.1
Original member Current member NCBI NM_001400005.1 NP_001386934.1 Accepted alive Link to Nucleotide Sequence:NM_001400005.1Link to Protein Sequence:NP_001386934.1Re-query CCDS DB by Nucleotide ID:NM_001400005Re-query CCDS DB by Protein ID:NP_001386934Link to BLAST:NP_001386934.1
Original member Current member NCBI NM_001400006.1 NP_001386935.1 Accepted alive Link to Nucleotide Sequence:NM_001400006.1Link to Protein Sequence:NP_001386935.1Re-query CCDS DB by Nucleotide ID:NM_001400006Re-query CCDS DB by Protein ID:NP_001386935Link to BLAST:NP_001386935.1
Original member Current member NCBI NM_001400007.1 NP_001386936.1 Accepted alive Link to Nucleotide Sequence:NM_001400007.1Link to Protein Sequence:NP_001386936.1Re-query CCDS DB by Nucleotide ID:NM_001400007Re-query CCDS DB by Protein ID:NP_001386936Link to BLAST:NP_001386936.1
Original member Current member NCBI NM_001400008.1 NP_001386937.1 Accepted alive Link to Nucleotide Sequence:NM_001400008.1Link to Protein Sequence:NP_001386937.1Re-query CCDS DB by Nucleotide ID:NM_001400008Re-query CCDS DB by Protein ID:NP_001386937Link to BLAST:NP_001386937.1
Original member Current member NCBI NM_001400010.1 NP_001386939.1 Accepted alive Link to Nucleotide Sequence:NM_001400010.1Link to Protein Sequence:NP_001386939.1Re-query CCDS DB by Nucleotide ID:NM_001400010Re-query CCDS DB by Protein ID:NP_001386939Link to BLAST:NP_001386939.1
Original member Current member NCBI NM_001400011.1 NP_001386940.1 Accepted alive Link to Nucleotide Sequence:NM_001400011.1Link to Protein Sequence:NP_001386940.1Re-query CCDS DB by Nucleotide ID:NM_001400011Re-query CCDS DB by Protein ID:NP_001386940Link to BLAST:NP_001386940.1
Original member Current member NCBI NM_001400012.1 NP_001386941.1 Accepted alive Link to Nucleotide Sequence:NM_001400012.1Link to Protein Sequence:NP_001386941.1Re-query CCDS DB by Nucleotide ID:NM_001400012Re-query CCDS DB by Protein ID:NP_001386941Link to BLAST:NP_001386941.1
Original member Current member NCBI NM_012297.5 NP_036429.2 Accepted alive Link to Nucleotide Sequence:NM_012297.5Link to Protein Sequence:NP_036429.2Re-query CCDS DB by Nucleotide ID:NM_012297Re-query CCDS DB by Protein ID:NP_036429Link to BLAST:NP_036429.2
Original member Current member NCBI NM_203505.3 NP_987101.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203505.3Link to Protein Sequence:NP_987101.1Re-query CCDS DB by Nucleotide ID:NM_203505Re-query CCDS DB by Protein ID:NP_987101Link to BLAST:NP_987101.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001386933.1 482 Q9UN86-1 482 100% 0 0
NP_001386934.1 482 Q9UN86-1 482 100% 0 0
NP_001386935.1 482 Q9UN86-1 482 100% 0 0
NP_001386936.1 482 Q9UN86-1 482 100% 0 0
NP_001386937.1 482 Q9UN86-1 482 100% 0 0
NP_001386939.1 482 Q9UN86-1 482 100% 0 0
NP_001386940.1 482 Q9UN86-1 482 100% 0 0
NP_001386941.1 482 Q9UN86-1 482 100% 0 0
NP_036429.2 482 Q9UN86-1 482 100% 0 0
NP_987101.1 482 Q9UN86-1 482 100% 0 0

Chromosomal Locations for CCDS 3571.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 75645430 75645702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75646338 75646456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75647029 75647157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75648639 75648741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75653983 75654081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75655066 75655246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75655768 75655870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75656924 75657014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75657557 75657730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75658843 75658924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75661931 75662025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1449 nt):
ATGGTTATGGAGAAGCCCAGTCCGCTGCTTGTAGGGCGGGAGTTTGTGAGGCAATATTATACTTTGCTGA
ATAAAGCTCCGGAATATTTACACAGGTTTTATGGCAGGAATTCTTCCTATGTTCATGGTGGAGTAGATGC
TAGTGGAAAGCCCCAGGAAGCTGTTTATGGCCAAAATGATATACACCACAAAGTATTATCTCTGAACTTC
AGTGAATGTCATACTAAAATTCGTCATGTGGATGCTCATGCAACCTTGAGTGATGGAGTAGTTGTCCAGG
TCATGGGTTTGCTGTCTAACAGTGGACAACCAGAAAGAAAGTTTATGCAAACCTTTGTTCTGGCTCCTGA
AGGATCTGTTCCAAATAAATTTTATGTTCACAATGATATGTTTCGTTATGAAGATGAAGTGTTTGGTGAT
TCTGAGCCTGAACTTGATGAAGAATCAGAAGATGAAGTAGAAGAGGAACAAGAAGAAAGACAACCATCTC
CTGAACCTGTGCAAGAAAATGCTAACAGTGGTTACTATGAAGCTCACCCTGTGACTAATGGCATAGAGGA
GCCTTTGGAAGAATCCTCTCATGAACCTGAACCTGAGCCAGAATCTGAAACAAAGACTGAAGAGCTGAAA
CCACAAGTGGAGGAGAAGAACTTAGAAGAACTAGAGGAGAAATCTACTACTCCTCCTCCGGCAGAACCTG
TTTCTCTGCCACAAGAACCACCAAAGGCTTTCTCCTGGGCTTCAGTGACCAGTAAAAACCTGCCTCCTAG
TGGTACTGTTTCTTCCTCTGGAATTCCACCCCATGTTAAAGCACCAGTCTCACAGCCAAGAGTCGAAGCT
AAACCAGAAGTTCAATCTCAGCCACCTCGTGTGCGTGAACAACGACCTAGAGAACGACCTGGTTTTCCTC
CTAGAGGACCAAGACCAGGCAGAGGAGATATGGAACAGAATGACTCTGACAACCGTAGAATAATTCGCTA
TCCAGATAGTCATCAACTTTTTGTTGGTAACTTGCCACATGATATTGATGAAAATGAGCTAAAGGAATTC
TTCATGAGTTTTGGAAACGTTGTGGAACTTCGCATCAATACCAAGGGTGTTGGGGGAAAGCTTCCAAATT
TTGGTTTTGTGGTTTTTGATGACTCTGAACCAGTTCAGAGAATCTTAATTGCAAAACCGATTATGTTTCG
AGGGGAAGTACGTTTAAATGTGGAAGAGAAAAAAACAAGAGCTGCAAGAGAGCGAGAAACCAGAGGTGGT
GGTGATGATCGCAGGGATATTAGGCGCAATGATCGAGGTCCCGGTGGTCCACGTGGAATTGTGGGTGGTG
GAATGATGCGTGATCGTGATGGAAGAGGACCTCCTCCAAGGGGTGGCATGGCACAGAAACTTGGCTCTGG
AAGAGGAACCGGGCAAATGGAGGGCCGCTTCACAGGACAGCGTCGCTGA

Translation (482 aa):
MVMEKPSPLLVGREFVRQYYTLLNKAPEYLHRFYGRNSSYVHGGVDASGKPQEAVYGQNDIHHKVLSLNF
SECHTKIRHVDAHATLSDGVVVQVMGLLSNSGQPERKFMQTFVLAPEGSVPNKFYVHNDMFRYEDEVFGD
SEPELDEESEDEVEEEQEERQPSPEPVQENANSGYYEAHPVTNGIEEPLEESSHEPEPEPESETKTEELK
PQVEEKNLEELEEKSTTPPPAEPVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEA
KPEVQSQPPRVREQRPRERPGFPPRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEF
FMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKPIMFRGEVRLNVEEKKTRAARERETRGG
GDDRRDIRRNDRGPGGPRGIVGGGMMRDRDGRGPPPRGGMAQKLGSGRGTGQMEGRFTGQRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH