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Report for CCDS14466.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14466.1 Public Homo sapiens X FAM133A 24 110 108 CCDS HistoryNCBI Gene:286499Re-query CCDS DB by CCDS ID:14466.1Re-query CCDS DB by GeneID:286499See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14466.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322139.4 ENSP00000318974.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000322139.4Link to Ensembl Protein Viewer:ENSP00000318974.4Re-query CCDS DB by Nucleotide ID:ENST00000322139Re-query CCDS DB by Protein ID:ENSP00000318974
Original member Current member EBI ENST00000332647.5 ENSP00000362169.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000332647.5Link to Ensembl Protein Viewer:ENSP00000362169.1Re-query CCDS DB by Nucleotide ID:ENST00000332647Re-query CCDS DB by Protein ID:ENSP00000362169
Original member Current member EBI ENST00000683942.1 ENSP00000507109.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683942.1Link to Ensembl Protein Viewer:ENSP00000507109.1Re-query CCDS DB by Nucleotide ID:ENST00000683942Re-query CCDS DB by Protein ID:ENSP00000507109
Original member Current member NCBI NM_001171109.2 NP_001164580.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001171109.2Link to Protein Sequence:NP_001164580.1Re-query CCDS DB by Nucleotide ID:NM_001171109Re-query CCDS DB by Protein ID:NP_001164580Link to BLAST:NP_001164580.1
Original member Current member NCBI NM_001171110.2 NP_001164581.1 Accepted alive Link to Nucleotide Sequence:NM_001171110.2Link to Protein Sequence:NP_001164581.1Re-query CCDS DB by Nucleotide ID:NM_001171110Re-query CCDS DB by Protein ID:NP_001164581Link to BLAST:NP_001164581.1
Original member Current member NCBI NM_001171111.2 NP_001164582.1 Accepted alive Link to Nucleotide Sequence:NM_001171111.2Link to Protein Sequence:NP_001164582.1Re-query CCDS DB by Nucleotide ID:NM_001171111Re-query CCDS DB by Protein ID:NP_001164582Link to BLAST:NP_001164582.1
Original member Current member NCBI NM_173698.3 NP_775969.1 Accepted alive Link to Nucleotide Sequence:NM_173698.3Link to Protein Sequence:NP_775969.1Re-query CCDS DB by Nucleotide ID:NM_173698Re-query CCDS DB by Protein ID:NP_775969Link to BLAST:NP_775969.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164580.1 248 Q8N9E0 248 100% 0 0
NP_001164581.1 248 Q8N9E0 248 100% 0 0
NP_001164582.1 248 Q8N9E0 248 100% 0 0
NP_775969.1 248 Q8N9E0 248 100% 0 0

Chromosomal Locations for CCDS 14466.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 93709420 93710166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGGGAAGCGGGATAATCGGGTAGCCTATATGAATCCTATAGCAATGGCCAGATGGAGAGGCCCAACTC
AATCTGTGGGCCCAACAATCCAAGATTATCTAAATCGACCAAGACCCACCTGGGAAGAAGTAAAGAAACA
ATTAGAAAATAAAAAAACAGGTTCAAAAGCATTAGCTGAATTTGAAGAAAAAATGAATGAAAATTGGAAG
AAAGAACTTGAAAAAAGCAGAGAGAAATTATTAAGTGGAAATGAGAGCTCATCTAAAAAAAGAGAAAGAA
AGAAAAAGAGAAAGAAGAAATCTTGTCGGTCTTCATCTTCTTCATCAAGCTCTGATTCTTCAAGCAGTTC
TTCAGATTCTGAGGATGAGGAAAAGAAACAAGGAAAAAGGAGAAAGAAAAAGAAGAACCGTTCATACAAA
TCATCCCAAAGCTCTACGCATGAATCAGAATCAGAGAGCAAGGAGTCTGTAAAAAAGAAAAAGAAGTCAA
AGGATGAAACAGAGAAAGAAAAGGATGTAAGAAGCCTCAGCAAAAAAAGAAAGAAAAGTTACCCTGATGA
TAAACCTTTATCATCTGAGTCCTCATCTGAATCAGATTATGAAGAGGATGTGCAAGCAAAAAAGAAGAGA
AGGTGTGAAGAGCGAGAACAAGCAAAGGAAAAAGTAAAGAAGAAGAAGAAGAAACAGCACAAGAAACATA
GTAAGAAGAAGAAAAAGAAGTCTGGATCAAGTCACAAGTCAAGGTAA

Translation (248 aa):
MGKRDNRVAYMNPIAMARWRGPTQSVGPTIQDYLNRPRPTWEEVKKQLENKKTGSKALAEFEEKMNENWK
KELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYK
SSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKR
RCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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