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Report for CCDS91004.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
91004.1 |
Public |
Homo sapiens |
1 |
CCDC18 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:343099](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:91004.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:343099](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 91004.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000690025.1 |
ENSP00000510597.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000690025.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000510597.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000690025](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000510597](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001378204.1 |
NP_001365133.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001378204.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001365133.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001378204](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001365133](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001365133.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 91004.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4368 nt): ATGGAATCTAGTTCATCAGACTACTATAATAAAGACAATGAAGAGGAAAGTTTGCTTGCAAATGTTGCTT CCTTAAGACATGAACTGAAGATAACAGAATGGAGTTTGCAGAGTTTAGGGGAAGAGTTATCCAGTGTTAG TCCAAGTGAAAATTCTGATTATGCCCCTAATCCTTCAAGGTCTGAAAAGCTAATTTTGGATGTTCAGCCT AGCCACCCTGGACTTTTGAATTATTCACCTTATGAAAACGTCTGTAAAATATCTGGTAGCAGCACTGATT TTCAAAAAAAGCCAAGAGATAAGATGTTTTCATCTTCTGCCCCTGTGGATCAGGAGATTAAAAGCCTTCG AGAGAAACTAAATAAACTTAGGCAACAGAATGCTTGTTTGGTCACACAGAATCATTCCTTAATGACTAAA TTTGAATCTATTCACTTTGAATTAACACAGTCAAGAGCAAAAGTTTCTATGCTTGAGTCTGCTCAACAGC AGGCAGCCAGTGTCCCAATCTTAGAAGAACAGATTATAAATTTGGAAGCAGAGGTTTCAGCTCAAGATAA AGTTTTGAGAGAGGCAGAAAATAAGCTGGAACAGAGCCAGAAAATGGTAATTGAAAAGGAACAGAGTTTG CAGGAGTCCAAAGAGGAATGTATAAAATTAAAGGTGGACTTACTTGAACAAACCAAACAAGGAAAAAGAG CTGAACGACAAAGGAATGAAGCACTATATAATGCCGAAGAGCTGAGTAAAGCTTTCCAACAATATAAAAA AAAAGTGGCTGAAAAACTGGAAAAGGTTCAAGCTGAAGAAGAAATATTAGAGAGAAATCTAACTAACTGT GAAAAAGAAAATAAAAGGCTACAAGAAAGGTGTGGTCTATATAAAAGTGAACTTGAAATTCTGAAAGAGA AATTAAGGCAGTTAAAAGAAGAAAATAACAACGGAAAAGAAAAATTAAGGATCATGGCAGTGAAAAATTC AGAAGTCATGGCACAACTAACTGAATCTAGACAAAGTATTTTGAAGCTAGAGAGTGAGTTAGAGAACAAA GACGAAATACTTAGAGACAAATTTTCTTTAATGAATGAAAACCGAGAATTAAAGGTCCGTGTTGCAGCAC AGAATGAGCGACTAGATTTATGTCAACAAGAAATTGAAAGTTCAAGGGTAGAACTAAGAAGTTTGGAAAA GATTATATCCCAGTTGCCATTAAAAAGAGAATTATTTGGCTTTAAATCATATCTTTCTAAATACCAGATG AGTAGCTTCTCAAACAAGGAAGACCGTTGCATTGGCTGCTGTGAGGCAAATAAATTGGTGATTTCGGAAT TGAGAATTAAGCTTGCAATAAAAGAGGCAGAAATTCAAAAGCTTCATGCAAACCTGACTGCAAATCAGTT ATCTCAGAGTCTTATTACTTGTAATGACAGCCAAGAAAGTAGCAAATTAAGTAGTTTAGAAACAGAACCT GTAAAGCTAGGTGGTCATCAAGTAGCAGAAAGCGTAAAAGATCAAAATCAACATACTATGAACAAGCAAT ATGAAAAAGAGAGGCAAAGACTTGTTACTGGAATAGAAGAACTACGTACTAAGCTGATACAAATAGAAGC TGAAAATTCTGATTTGAAGGTTAACATGGCTCACAGAACTAGTCAGTTTCAGCTGATTCAAGAGGAGCTG CTAGAGAAAGCTTCAAACTCCAGCAAACTGGAAAGTGAAATGACAAAGAAATGTTCTCAACTTTTAACTC TTGAGAAACAGCTGGAAGAAAAGATAGTTGCTTATTCCTCTATTGCTGCAAAAAATGCAGAACTAGAACA GGAGCTTATGGAAAAGAATGAAAAGATAAGGAGTCTAGAAACCAATATTAATACAGAGCATGAGAAAATT TGTTTAGCCTTTGAAAAAGCAAAGAAAATTCACTTGGAACAGCATAAAGAAATGGAAAAGCAGATTGAAA GACTTGAAGCTCAACTAGAGAAAAAGGACCAACAATTTAAAGAACAAGAAAAGACTATGTCCATGTTGCA ACAAGATATAATATGCAAACAACATCATCTTGAATCACTAGATAGACTCTTGACGGAAAGCAAAGGGGAA ATGAAAAAGGAAAATATGAAGAAAGATGAAGCTTTAAAAGCATTACAGAACCAAGTATCTGAAGAAACAA TCAAGGTTAGGCAACTAGATTCAGCATTGGAAATTTGTAAGGAAGAACTTGTCTTGCATTTGAATCAATT GGAAGGAAATAAGGAAAAGTTTGAAAAACAGTTAAAGAAGAAATCTGAAGAGGTATATTGTTTACAGAAA GAGCTAAAGATAAAAAATCACAGTCTTCAAGAGACTTCTGAGCAAAACGTTATTCTACAGCATACTCTTC AGCAACAGCAGCAAATGTTACAACAAGAGACAATTAGAAATGGAGAGCTAGAAGATACTCAAACTAAACT TGAAAAACAGGTGTCAAAACTGGAACAAGAACTTCAAAAACAAAGGGAAAGTTCAGCTGAAAAGTTGAGA AAAATGGAGGAGAAATGTGAATCAGCTGCACATGAAGCAGATTTGAAAAGGCAAAAAGTGATTGAGCTTA CTGGCACTGCCAGGCAAGTAAAGATTGAGATGGATCAGTACAAAGAAGAGCTGTCTAAAATGGAAAAGGA AATAATGCACCTAAAACGAGATGGAGAAAATAAAGCAATGCACCTCTCTCAATTAGATATGATCTTAGAT CAGACAAAGACAGAGCTAGAAAAGAAAACAAATGCTGTAAAGGAGTTAGAAAAGTTACAGCACAGTACTG AAACTGAACTAACAGAAGCCTTGCAAAAACGGGAAGTACTTGAGACTGAACTACAAAATGCTCATGGAGA ATTAAAAAGTACTTTAAGACAACTCCAGGAATTGAGAGATGTACTACAGAAGGCTCAATTATCATTAGAG GAAAAATACACTACTATAAAGGATCTCACAGCTGAACTTAGAGAATGCAAGATGGAGATTGAAGACAAAA AGCAGGAGCTCCTTGAAATGGATCAGGCACTTAAAGAGAGAAATTGGGAACTAAAGCAAAGAGCAGCTCA GGTTACACATTTGGATATGACTATTCGTGAGCACAGAGGAGAAATGGAACAAAAAATAATTAAATTAGAA GGTACTCTGGAGAAATCAGAATTGGAACTTAAAGAATGTAACAAACAGATAGAAAGTCTGAATGACAAAT TACAAAATGCTAAAGAACAGCTTCGAGAAAAAGAGTTTATAATGCTACAAAATGAACAGGAGATAAGTCA ACTGAAAAAAGAAATTGAAAGAACACAACAAAGGATGAAAGAAATGGAGAGTGTTATGAAAGAGCAAGAA CAGTACATTGCCACTCAGTACAAGGAGGCCATAGATTTGGGGCAAGAATTGAGGCTGACCCGGGAGCAGG TGCAGAACTCTCATACAGAATTGGCAGAGGCTCGTCATCAGCAAGTCCAAGCACAGAGAGAAATAGAAAG GCTCTCTAGTGAACTGGAGGATATGAAGCAACTCTCTAAAGAGAAAGATGCTCATGGAAACCATTTAGCT GAAGAACTGGGGGCTTCTAAAGTACGTGAAGCTCATTTAGAAGCAAGAATGCAAGCAGAAATCAAGAAAT TGTCAGCAGAAGTAGAATCTCTCAAAGAAGCTTATCATATGGAGATGATTTCACATCAAGAGAACCATGC AAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGCAACTAAACGAACAGTTAGAGAAGGCA AAATTGGAATTAGAAGAAGCTCAGGATACTGTAAGCAATTTGCATCAACAAGTCCAAGATAGGAATGAAG TAATTGAAGCTGCAAATGAAGCATTACTTACTAAAGAATCAGAATTAACCAGATTACAGGCCAAAATTTC TGGACATGAAAAGGCAGAAGACATCAAGTTTCTGCCAGCCCCATTTACATCTCCAACAGAAATTATGCCT GATGTTCAAGATCCAAAATTTGCTAAATGTTTTCACACATCTTTTTCCAAGTGTACAAAATTACGTCGCT CTATTAGTGCCAGTGATCTTACTTTCAAAATTCATGGTGATGAAGATCTTTCTGAAGAATTACTACAGGA CTTAAAGAAAATGCAATTAGAACAGCCTTCAACATTAGAAGAAAGCCATAAGAATCTGACTTACACCCAG CCAGACTCATTTAAACCTCTCACATATAACCTAGAAGCTGATAGTTCTGAGAATAATGACTTTAACACGC TTAGTGGGATGCTAAGATACATAAACAAAGAAGTAAGACTATTAAAAAAGTCTTCTATGCAAACAGGTGC TGGTTTAAATCAGGGAGAAAATGTGTAA
Translation (1455 aa): MESSSSDYYNKDNEEESLLANVASLRHELKITEWSLQSLGEELSSVSPSENSDYAPNPSRSEKLILDVQP SHPGLLNYSPYENVCKISGSSTDFQKKPRDKMFSSSAPVDQEIKSLREKLNKLRQQNACLVTQNHSLMTK FESIHFELTQSRAKVSMLESAQQQAASVPILEEQIINLEAEVSAQDKVLREAENKLEQSQKMVIEKEQSL QESKEECIKLKVDLLEQTKQGKRAERQRNEALYNAEELSKAFQQYKKKVAEKLEKVQAEEEILERNLTNC EKENKRLQERCGLYKSELEILKEKLRQLKEENNNGKEKLRIMAVKNSEVMAQLTESRQSILKLESELENK DEILRDKFSLMNENRELKVRVAAQNERLDLCQQEIESSRVELRSLEKIISQLPLKRELFGFKSYLSKYQM SSFSNKEDRCIGCCEANKLVISELRIKLAIKEAEIQKLHANLTANQLSQSLITCNDSQESSKLSSLETEP VKLGGHQVAESVKDQNQHTMNKQYEKERQRLVTGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEEL LEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTEHEKI CLAFEKAKKIHLEQHKEMEKQIERLEAQLEKKDQQFKEQEKTMSMLQQDIICKQHHLESLDRLLTESKGE MKKENMKKDEALKALQNQVSEETIKVRQLDSALEICKEELVLHLNQLEGNKEKFEKQLKKKSEEVYCLQK ELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSAEKLR KMEEKCESAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILD QTKTELEKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTLRQLQELRDVLQKAQLSLE EKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLE GTLEKSELELKECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKKEIERTQQRMKEMESVMKEQE QYIATQYKEAIDLGQELRLTREQVQNSHTELAEARHQQVQAQREIERLSSELEDMKQLSKEKDAHGNHLA EELGASKVREAHLEARMQAEIKKLSAEVESLKEAYHMEMISHQENHAKWKISADSQKSSVQQLNEQLEKA KLELEEAQDTVSNLHQQVQDRNEVIEAANEALLTKESELTRLQAKISGHEKAEDIKFLPAPFTSPTEIMP DVQDPKFAKCFHTSFSKCTKLRRSISASDLTFKIHGDEDLSEELLQDLKKMQLEQPSTLEESHKNLTYTQ PDSFKPLTYNLEADSSENNDFNTLSGMLRYINKEVRLLKKSSMQTGAGLNQGENV
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