NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73060.1 Public Homo sapiens 10 ZMYND11 24 110 108 CCDS HistoryNCBI Gene:10771Re-query CCDS DB by CCDS ID:73060.1Re-query CCDS DB by GeneID:10771See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73060.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000704295.1 ENSP00000515819.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704295.1Link to Ensembl Protein Viewer:ENSP00000515819.1Re-query CCDS DB by Nucleotide ID:ENST00000704295Re-query CCDS DB by Protein ID:ENSP00000515819
Original member Current member EBI ENST00000704303.1 ENSP00000515827.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000704303.1Link to Ensembl Protein Viewer:ENSP00000515827.1Re-query CCDS DB by Nucleotide ID:ENST00000704303Re-query CCDS DB by Protein ID:ENSP00000515827
Original member Current member NCBI NM_001202464.3 NP_001189393.1 Accepted alive Link to Nucleotide Sequence:NM_001202464.3Link to Protein Sequence:NP_001189393.1Re-query CCDS DB by Nucleotide ID:NM_001202464Re-query CCDS DB by Protein ID:NP_001189393Link to BLAST:NP_001189393.1
Original member Current member NCBI NM_001370103.2 NP_001357032.1 Accepted alive Link to Nucleotide Sequence:NM_001370103.2Link to Protein Sequence:NP_001357032.1Re-query CCDS DB by Nucleotide ID:NM_001370103Re-query CCDS DB by Protein ID:NP_001357032Link to BLAST:NP_001357032.1
Original member Current member NCBI NM_001370104.2 NP_001357033.1 Accepted alive Link to Nucleotide Sequence:NM_001370104.2Link to Protein Sequence:NP_001357033.1Re-query CCDS DB by Nucleotide ID:NM_001370104Re-query CCDS DB by Protein ID:NP_001357033Link to BLAST:NP_001357033.1
Original member Current member NCBI NM_001370105.2 NP_001357034.1 Accepted alive Link to Nucleotide Sequence:NM_001370105.2Link to Protein Sequence:NP_001357034.1Re-query CCDS DB by Nucleotide ID:NM_001370105Re-query CCDS DB by Protein ID:NP_001357034Link to BLAST:NP_001357034.1
Original member Current member NCBI NM_001370106.2 NP_001357035.1 Accepted alive Link to Nucleotide Sequence:NM_001370106.2Link to Protein Sequence:NP_001357035.1Re-query CCDS DB by Nucleotide ID:NM_001370106Re-query CCDS DB by Protein ID:NP_001357035Link to BLAST:NP_001357035.1
Original member Current member NCBI NM_001370107.2 NP_001357036.1 Accepted alive Link to Nucleotide Sequence:NM_001370107.2Link to Protein Sequence:NP_001357036.1Re-query CCDS DB by Nucleotide ID:NM_001370107Re-query CCDS DB by Protein ID:NP_001357036Link to BLAST:NP_001357036.1
Original member Current member NCBI NM_001370108.2 NP_001357037.1 Accepted alive Link to Nucleotide Sequence:NM_001370108.2Link to Protein Sequence:NP_001357037.1Re-query CCDS DB by Nucleotide ID:NM_001370108Re-query CCDS DB by Protein ID:NP_001357037Link to BLAST:NP_001357037.1
Original member Current member NCBI NM_001370109.2 NP_001357038.1 Accepted alive Link to Nucleotide Sequence:NM_001370109.2Link to Protein Sequence:NP_001357038.1Re-query CCDS DB by Nucleotide ID:NM_001370109Re-query CCDS DB by Protein ID:NP_001357038Link to BLAST:NP_001357038.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001189393.1 548 Q15326-2 548 100% 0 0
NP_001357032.1 548 Q15326-2 548 100% 0 0
NP_001357033.1 548 Q15326-2 548 100% 0 0
NP_001357034.1 548 Q15326-2 548 100% 0 0
NP_001357035.1 548 Q15326-2 548 100% 0 0
NP_001357036.1 548 Q15326-2 548 100% 0 0
NP_001357037.1 548 Q15326-2 548 100% 0 0
NP_001357038.1 548 Q15326-2 548 100% 0 0

Chromosomal Locations for CCDS 73060.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 180013 180128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 209889 210048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 236838 236915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 237585 237677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 239438 239525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 240056 240111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 240893 240970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 242021 242139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 246766 246973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 247398 247466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 248336 248608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 248903 249088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 252348 252470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1647 nt):
ATGGCACGTTTAACAAAAAGACGACAGGCGGATACAAAAGCTATCCAGCATCTTTGGGCAGCCATTGAGA
TTATACGGAACCAGAAGCAGATTGCCAACATTGACCGTATTACAAAGTATATGTCTCGAGTCCACGGTAT
GCACCCTAAAGAGACCACCCGTCAGCTGAGCTTAGCTGTGAAAGATGGTCTTATTGTCGAAACTCTAACA
GTGGGCTGCAAAGGTTCAAAAGCTGGTATTGAACAAGAAGGATATTGGTTGCCAGGAGATGAGATTAGCA
TTAAGAAGAAGAATACAAACAAACAGGAGATGGGCACATACCTCAGATTCATTGTCTCCCGCATGAAGGA
GAGGGCTATAGATCTTAATAAAAAGGGGAAGGACAATAAACACCCGATGTACAGGAGGCTGGTGCACTCA
GCTGTGGACGTTCCCACCATTCAAGAGAAAGTGAATGAAGGGAAATACCGAAGTTATGAAGAGTTCAAAG
CTGATGCCCAATTGCTTCTCCACAATACCGTGATTTTCTATGGAGCAGACAGTGAGCAAGCTGACATTGC
GAGGATGCTATATAAAGACACATGTCATGAGCTGGATGAACTGCAGCTTTGCAAGAATTGCTTTTACTTG
TCAAATGCTCGTCCTGACAACTGGTTCTGTTATCCTTGTATACCTAATCATGAGCTGGTTTGGGCTAAAA
TGAAAGGTTTTGGGTTTTGGCCAGCCAAAGTCATGCAGAAAGAAGACAATCAAGTCGACGTTCGCTTCTT
TGGCCACCACCACCAGAGGGCCTGGATTCCTTCTGAAAACATTCAAGATATCACAGTCAACATTCATCGG
CTGCACGTGAAGCGCAGTATGGGTTGGAAAAAGGCCTGTGATGAGCTGGAGCTGCATCAGCGTTTCCTAC
GAGAAGGGAGATTTTGGAAATCTAAGAATGAGGACCGAGGTGAGGAAGAGGCAGAATCCAGTATCTCCTC
CACCAGTAATGAGCAGCTAAAGGTCACTCAAGAACCAAGAGCAAAGAAAGGACGACGTAATCAAAGTGTG
GAGCCCAAAAAGGAAGAACCAGAGCCTGAAACAGAAGCAGTAAGTTCTAGCCAGGAAATACCCACGATGC
CTCAGCCCATCGAAAAAGTCTCCGTGTCAACTCAGACAAAGAAGTTAAGTGCCTCTTCACCAAGAATGCT
GCATCGGAGCACCCAGACCACAAACGACGGCGTGTGTCAGAGCATGTGCCATGACAAATACACCAAGATC
TTCAATGACTTCAAAGACCGGATGAAGTCGGACCACAAGCGGGAGACAGAGCGTGTTGTCCGAGAAGCTC
TGGAGAAGCTGCGTTCTGAAATGGAAGAAGAAAAGAGACAAGCTGTAAATAAAGCTGTAGCCAACATGCA
GGGTGAGATGGACAGAAAATGTAAGCAAGTAAAGGAAAAGTGTAAGGAAGAATTTGTAGAAGAAATCAAG
AAGCTGGCAACACAGCACAAGCAACTGATTTCTCAGACCAAGAAGAAGCAGTGGTGCTACAACTGTGAGG
AGGAGGCCATGTACCACTGCTGCTGGAACACATCCTACTGCTCCATCAAGTGCCAGCAGGAGCACTGGCA
CGCGGAGCACAAGCGCACCTGCCGCCGGAAAAGATGA

Translation (548 aa):
MARLTKRRQADTKAIQHLWAAIEIIRNQKQIANIDRITKYMSRVHGMHPKETTRQLSLAVKDGLIVETLT
VGCKGSKAGIEQEGYWLPGDEISIKKKNTNKQEMGTYLRFIVSRMKERAIDLNKKGKDNKHPMYRRLVHS
AVDVPTIQEKVNEGKYRSYEEFKADAQLLLHNTVIFYGADSEQADIARMLYKDTCHELDELQLCKNCFYL
SNARPDNWFCYPCIPNHELVWAKMKGFGFWPAKVMQKEDNQVDVRFFGHHHQRAWIPSENIQDITVNIHR
LHVKRSMGWKKACDELELHQRFLREGRFWKSKNEDRGEEEAESSISSTSNEQLKVTQEPRAKKGRRNQSV
EPKKEEPEPETEAVSSSQEIPTMPQPIEKVSVSTQTKKLSASSPRMLHRSTQTTNDGVCQSMCHDKYTKI
FNDFKDRMKSDHKRETERVVREALEKLRSEMEEEKRQAVNKAVANMQGEMDRKCKQVKEKCKEEFVEEIK
KLATQHKQLISQTKKKQWCYNCEEEAMYHCCWNTSYCSIKCQQEHWHAEHKRTCRRKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH