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Report for CCDS77358.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77358.1 Public Homo sapiens 19 LENG9 24 110 108 CCDS HistoryNCBI Gene:94059Re-query CCDS DB by CCDS ID:77358.1Re-query CCDS DB by GeneID:94059See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77358.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611161.2 ENSP00000479355.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000611161.2Link to Ensembl Protein Viewer:ENSP00000479355.1Re-query CCDS DB by Nucleotide ID:ENST00000611161Re-query CCDS DB by Protein ID:ENSP00000479355
Original member Current member NCBI NM_001301782.2 NP_001288711.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001301782.2Link to Protein Sequence:NP_001288711.1Re-query CCDS DB by Nucleotide ID:NM_001301782Re-query CCDS DB by Protein ID:NP_001288711Link to BLAST:NP_001288711.1

Chromosomal Locations for CCDS 77358.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 54462090 54463526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGGCAGCGGCCAGAGAGCCGGAGTTGCCGCAGGAAGCCCCCGCCACGGAACCCGCGCCCCCGCCGGCCT
GCCGCTTCTTCCTGGAAGGCCGCTGCCGCTTCGGCGCCCGCTGCCGCCAGCCCCACCCTGGGGCGCCGGC
GCCGCCTGGCCGCGAGGCGCAGCCGGAGGCCGGGGCCAAGAAGCCGCCGCTGCGCACAGCCGCGGACGTC
ATCCAGCGCATCCGCTGGGACCCGCGCCTCGACCCCGCCGACTTCTCGGTGGGCTACGTCGACCGCTTTC
TGGGTGTGCGCGAGGAGCCCTTCAGCGCCTTTTGCTGGGACCAGCCGCTGGCGGCGCTCGGGCCGGGCGT
GCTGGCAGTGCCCCAGCACCGCGTGCGCTTCTTCCGCTTCCGTGGCCGCCTTGTGTGGGACCGCGCCTCG
CGCACCGACCTCGTCTTTGGCTCTGGCTCGGCGGCGGGACGCGGGCCCACCATCCTGGACGCACCGAACA
CCGAGGGCGCCCACGGGGCAGAGGGTGCCGAGTGGACACTGGCGGGGACAGGTCAGGAGGCCCAGGCTGC
CCCCAAGCGAGGGAGCACAAGGCCGCTCTGCACAGGGCACCAGGAACCAGGCGTGGAGGAACCCGGAGAG
CTGGAGGCGGCCCAGGAGAGGGCGCTGGGCACAGCTGCTGATTTGGGAACACTGGCCCCAAGAGGACGCC
TCGCCGGAGTGACTGAGGCACTGAAGCCAACAGCAGCCACCAGGACCACATTGCTGGGGGGCAAGGAAGC
ACAGGCCCTGGGAGTCCCGGGGGGCTCCGCTGAGACGACAGAAGCCGAGTGGGGTCCTGCGGCCTGGCCC
GAGGACAAAAGGGCCCGCCTTAGTGTTGCAGCCCCTTGCCAACCGCGCCCCACACATTTTGTGGCCCTCA
TGGTGACCGAGCCTGGGCTACAAGCAGAAGTGACCAAGGCCCAGGAATACCTGGTCCACGTGGCCCCACA
CTGCGCCAACTTCCTAGTGCCCTCTCAGAACCTACACCTGACCCTGGCCCTGCTGCGACTGGCAGGCGCT
GGGGAGGAGGCCGCTGCCATTGGAGCTCTGAGACGGGCCCTCTTGGCCCCGGGGCTAAATGCACCCCCTC
GGCTGAGCTTTAGAAAGCTGGTCCTCCTGGGCCCGCATGTGCTGTGTGCCCCACCCTCTCCCACACTGGA
AAGCATGGCACAAGTGCTGAGCCAGAGGCTGGAAGCCGAGGGGCTGAGTACACTACAGTCTCCAGGGCAG
CTGCACCCCCACCTCACCGTGGCCAAGGTGCCCCATGGTTCCCAGGTCCACCTCCCCAAGCTGGAGTTCA
CCCTCAGCCAGGAAGTGGGGTGCCAGCCCCTGCAGACACTCTGGCTGTGCCGTATAGGGAGGACAGGGGG
GCCTTTCCAGCCCCTGGCTGAGATCCCCCTGGAGTGA

Translation (478 aa):
MAAAREPELPQEAPATEPAPPPACRFFLEGRCRFGARCRQPHPGAPAPPGREAQPEAGAKKPPLRTAADV
IQRIRWDPRLDPADFSVGYVDRFLGVREEPFSAFCWDQPLAALGPGVLAVPQHRVRFFRFRGRLVWDRAS
RTDLVFGSGSAAGRGPTILDAPNTEGAHGAEGAEWTLAGTGQEAQAAPKRGSTRPLCTGHQEPGVEEPGE
LEAAQERALGTAADLGTLAPRGRLAGVTEALKPTAATRTTLLGGKEAQALGVPGGSAETTEAEWGPAAWP
EDKRARLSVAAPCQPRPTHFVALMVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQNLHLTLALLRLAGA
GEEAAAIGALRRALLAPGLNAPPRLSFRKLVLLGPHVLCAPPSPTLESMAQVLSQRLEAEGLSTLQSPGQ
LHPHLTVAKVPHGSQVHLPKLEFTLSQEVGCQPLQTLWLCRIGRTGGPFQPLAEIPLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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