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Report for CCDS46431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46431.1 Public Homo sapiens 2 ERMN 24 110 108 CCDS HistoryNCBI Gene:57471Re-query CCDS DB by CCDS ID:46431.1Re-query CCDS DB by GeneID:57471See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46431.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410096.6 ENSP00000387047.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000410096.6Link to Ensembl Protein Viewer:ENSP00000387047.1Re-query CCDS DB by Nucleotide ID:ENST00000410096Re-query CCDS DB by Protein ID:ENSP00000387047
Original member Current member NCBI NM_001304344.2 NP_001291273.1 Accepted alive Link to Nucleotide Sequence:NM_001304344.2Link to Protein Sequence:NP_001291273.1Re-query CCDS DB by Nucleotide ID:NM_001304344Re-query CCDS DB by Protein ID:NP_001291273Link to BLAST:NP_001291273.1
Original member Current member NCBI NM_001304345.2 NP_001291274.1 Accepted alive Link to Nucleotide Sequence:NM_001304345.2Link to Protein Sequence:NP_001291274.1Re-query CCDS DB by Nucleotide ID:NM_001304345Re-query CCDS DB by Protein ID:NP_001291274Link to BLAST:NP_001291274.1
Original member Current member NCBI NM_020711.3 NP_065762.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020711.3Link to Protein Sequence:NP_065762.1Re-query CCDS DB by Nucleotide ID:NM_020711Re-query CCDS DB by Protein ID:NP_065762Link to BLAST:NP_065762.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291273.1 284 Q8TAM6-1 284 100% 0 0
NP_001291274.1 284 Q8TAM6-1 284 100% 0 0
NP_065762.1 284 Q8TAM6-1 284 100% 0 0

Chromosomal Locations for CCDS 46431.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 157321271 157321791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 157324670 157324762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 157325402 157325642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (855 nt):
ATGACAGATGTTCCGGCTACATTTACCCAGGCTGAGTGTAATGGGGATAAACCACCTGAAAACGGTCAAC
AAACAATCACTAAAATCAGTGAGGAATTGACTGATGTGGACAGCCCCCTGCCACACTACAGGGTAGAACC
CAGTCTGGAAGGTGCACTCACCAAAGGAAGTCAGGAGGAAAGAAGAAAATTACAAGGGAACATGCTGCTC
AACTCATCCATGGAGGACAAAATGCTAAAAGAAAACCCAGAAGAGAAACTCTTTATTGTTCATAAGGCTA
TCACAGATCTTTCTCTCCAAGAAACTAGTGCTGATGAAATGACATTCAGAGAAGGGCATCAGTGGGAGAA
GATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAA
GAGGAAGAAGATGAGGACAGGAAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGGCTGGGATTTCGAA
AACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCAGAAGGTTTGGGATGAAGAAATTGA
TGATGATGATGATGATAATTGCAATAATGATGAAGATGAAGTTCGAGTGATAGAATTTAAGAAAAAACAT
GAAGAGGTTTCTCAATTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGTTCCC
AAGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCAG
ATACAATACAATATCCTATCGGAAAATCAGAAAGGGAAATACCAAGCAAAGAATTGATGAATTCGAGTCT
ATGATGCATTTATAA

Translation (284 aa):
MTDVPATFTQAECNGDKPPENGQQTITKISEELTDVDSPLPHYRVEPSLEGALTKGSQEERRKLQGNMLL
NSSMEDKMLKENPEEKLFIVHKAITDLSLQETSADEMTFREGHQWEKIPLSGSNQEIRRQKERITEQPLK
EEEDEDRKNKGHQAAEIEWLGFRKPSQADMLHSKHDEEQKVWDEEIDDDDDDNCNNDEDEVRVIEFKKKH
EEVSQFKEEGDASEDSPLSSASSQAVTPDEQPTLGKKSDISRNAYSRYNTISYRKIRKGNTKQRIDEFES
MMHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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