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Report for CCDS3318.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
3318.1 |
Public |
Homo sapiens |
3 |
WDR53 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:348793](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:3318.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:348793](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 3 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 3318.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000332629.7 |
ENSP00000328079.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000332629.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000328079.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000332629](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000328079](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001345906.2 |
NP_001332835.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001345906.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001332835.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001345906](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001332835](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001332835.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001345907.2 |
NP_001332836.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001345907.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001332836.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001345907](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001332836](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001332836.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001345908.2 |
NP_001332837.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001345908.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001332837.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001345908](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001332837](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001332837.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001345909.2 |
NP_001332838.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001345909.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001332838.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001345909](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001332838](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001332838.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001345910.2 |
NP_001332839.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001345910.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001332839.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001345910](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001332839](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001332839.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_182627.3 |
NP_872433.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_182627.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_872433.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_182627](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_872433](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_872433.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 3318.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1077 nt): ATGGCAGTCAAGTGGACGGGTGGGCATTCTTCTCCTGTCCTCTGCCTGAATGCAAGTAAAGAAGGGCTGC TGGCTTCTGGAGCAGAGGGCGGAGATCTCACGGCTTGGGGTGAAGATGGAACTCCATTAGGACACACGCG GTTCCAAGGGGCTGATGATGTTACCAGTGTCTTATTTTCTCCCTCCTGTCCCACCAAGCTCTATGCCTCA CATGGAGAAACCATTAGTGTACTGGATGTCAGGTCCCTCAAAGATTCCTTGGACCATTTTCATGTGAATG AAGAAGAAATCAATTGTCTTTCATTGAATCAAACGGAAAACCTGCTGGCTTCTGCTGACGACTCTGGGGC AATCAAAATCCTAGACTTGGAAAACAAGAAAGTTATCAGATCCTTGAAGAGACATTCCAATATCTGCTCC TCAGTGGCTTTTCGGCCTCAGAGGCCTCAGAGCCTGGTGTCATGTGGACTGGATATGCAGGTGATGCTGT GGAGTCTTCAAAAAGCCCGACCACTCTGGATTACAAATTTACAGGAGGATGAAACAGAAGAAATGGAAGG CCCACAGTCACCTGGTCAGCTCTTAAACCCTGCCCTAGCCCATTCTATCTCTGTGGCTTCGTGTGGTAAT ATTTTTAGTTGTGGTGCAGAAGATGGTAAGGTTCGAATCTTTCGGGTGATGGGAGTTAAGTGTGAACAGG AACTGGGATTTAAGGGCCACACTTCAGGGGTATCCCAGGTCTGCTTTCTCCCAGAATCCTATTTGCTGCT TACTGGAGGGAATGATGGGAAGATCACGTTGTGGGATGCAAACAGTGAAGTTGAGAAAAAACAGAAGAGT CCCACAAAACGTACCCACAGGAAGAAACCTAAAAGAGGAACTTGCACCAAGCAGGGTGGAAATACTAACG CTTCAGTAACAGATGAGGAAGAACATGGCAACATTTTACCAAAGCTAAATATTGAACATGGAGAAAAAGT GAACTGGCTCTTGGGTACAAAAATAAAGGGACACCAAAATATATTAGTAGCTGATCAAACTAGTTGTATA TCTGTATACCCCTTAAATGAATTTTAA
Translation (358 aa): MAVKWTGGHSSPVLCLNASKEGLLASGAEGGDLTAWGEDGTPLGHTRFQGADDVTSVLFSPSCPTKLYAS HGETISVLDVRSLKDSLDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDLENKKVIRSLKRHSNICS SVAFRPQRPQSLVSCGLDMQVMLWSLQKARPLWITNLQEDETEEMEGPQSPGQLLNPALAHSISVASCGN IFSCGAEDGKVRIFRVMGVKCEQELGFKGHTSGVSQVCFLPESYLLLTGGNDGKITLWDANSEVEKKQKS PTKRTHRKKPKRGTCTKQGGNTNASVTDEEEHGNILPKLNIEHGEKVNWLLGTKIKGHQNILVADQTSCI SVYPLNEF
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