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Report for CCDS6669.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6669.1 Public Homo sapiens 9 RMI1 24 110 108 CCDS HistoryNCBI Gene:80010Re-query CCDS DB by CCDS ID:6669.1Re-query CCDS DB by GeneID:80010See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6669.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325875.7 ENSP00000317039.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325875.7Link to Ensembl Protein Viewer:ENSP00000317039.3Re-query CCDS DB by Nucleotide ID:ENST00000325875Re-query CCDS DB by Protein ID:ENSP00000317039
Original member Current member EBI ENST00000445877.6 ENSP00000402433.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000445877.6Link to Ensembl Protein Viewer:ENSP00000402433.2Re-query CCDS DB by Nucleotide ID:ENST00000445877Re-query CCDS DB by Protein ID:ENSP00000402433
Original member Current member NCBI NM_001358291.2 NP_001345220.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001358291.2Link to Protein Sequence:NP_001345220.1Re-query CCDS DB by Nucleotide ID:NM_001358291Re-query CCDS DB by Protein ID:NP_001345220Link to BLAST:NP_001345220.1
Original member Current member NCBI NM_001358292.2 NP_001345221.1 Accepted alive Link to Nucleotide Sequence:NM_001358292.2Link to Protein Sequence:NP_001345221.1Re-query CCDS DB by Nucleotide ID:NM_001358292Re-query CCDS DB by Protein ID:NP_001345221Link to BLAST:NP_001345221.1
Original member Current member NCBI NM_001358293.2 NP_001345222.1 Accepted alive Link to Nucleotide Sequence:NM_001358293.2Link to Protein Sequence:NP_001345222.1Re-query CCDS DB by Nucleotide ID:NM_001358293Re-query CCDS DB by Protein ID:NP_001345222Link to BLAST:NP_001345222.1
Original member Current member NCBI NM_001358294.2 NP_001345223.1 Accepted alive Link to Nucleotide Sequence:NM_001358294.2Link to Protein Sequence:NP_001345223.1Re-query CCDS DB by Nucleotide ID:NM_001358294Re-query CCDS DB by Protein ID:NP_001345223Link to BLAST:NP_001345223.1
Original member Current member NCBI NM_024945.3 NP_079221.2 Accepted alive Link to Nucleotide Sequence:NM_024945.3Link to Protein Sequence:NP_079221.2Re-query CCDS DB by Nucleotide ID:NM_024945Re-query CCDS DB by Protein ID:NP_079221Link to BLAST:NP_079221.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345220.1 625 Q9H9A7 625 100% 0 0
NP_001345221.1 625 Q9H9A7 625 100% 0 0
NP_001345222.1 625 Q9H9A7 625 100% 0 0
NP_001345223.1 625 Q9H9A7 625 100% 0 0
NP_079221.2 625 Q9H9A7 625 100% 0 0

Chromosomal Locations for CCDS 6669.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 84000987 84002864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1878 nt):
ATGAATGTGACTAGTATTGCATTAAGAGCTGAAACTTGGCTTTTAGCTGCATGGCATGTTAAAGTACCTC
CGATGTGGCTGGAAGCTTGTATTAACTGGATTCAAGAAGAAAATAATAATGTTAACTTGAGTCAGGCCCA
AATGAATAAACAAGTGTTTGAGCAGTGGCTCCTTACTGATCTGAGGGATTTGGAGCATCCTCTTTTACCC
GATGGCATTTTAGAAATTCCAAAAGGAGAATTAAATGGATTTTATGCTCTGCAGATTAATTCCTTGGTTG
ATGTAAGTCAGCCTGCATACTCCCAGATACAGAAGTTGAGAGGAAAGAATACAACAAATGATCTAGTTAC
AGCTGAAGCACAAGTAACCCCAAAACCTTGGGAAGCAAAGCCTTCACGAATGTTGATGCTGCAGCTAACT
GATGGAATCGTACAAATACAGGGAATGGAATATCAGCCTATTCCAATTCTTCATAGTGATCTTCCTCCAG
GTACAAAAATTTTGATTTATGGAAATATATCTTTCCGTCTTGGTGTTCTCTTATTGAAACCAGAAAACGT
GAAAGTGTTAGGAGGTGAAGTAGATGCTCTTTTAGAAGAATATGCCCAAGAAAAAGTACTTGCAAGATTA
ATAGGGGAACCTGATCTTGTAGTTTCAGTCATACCAAACAATTCTAACGAAAACATTCCCAGAGTTACAG
ATGTTCTAGATCCTGCATTAGGTCCTTCTGATGAAGAACTCTTGGCAAGTCTTGATGAAAATGATGAGCT
TACAGCAAATAATGACACTTCCTCAGAACGATGTTTCACCACAGGTAGTTCCTCAAATACCATTCCCACA
AGACAGTCAAGTTTTGAGCCAGAATTTGTTATTTCTCCAAGACCAAAAGAGGAACCATCAAACCTATCTA
TACATGTAATGGATGGAGAATTAGATGACTTTTCACTGGAGGAGGCCTTGCTTTTAGAAGAAACTGTCCA
GAAAGAACAGATGGAAACTAAGGAATTGCAACCATTGACTTTTAACAGAAATGCCGATCGAAGTATAGAG
AGATTTTCACATAATCCTAATACTACGAATAACTTTTCTTTGACTTGCAAAAATGGAAACAATAATTGGA
GTGAAAAAAATGTATCTGAACAAATGACTAATGAAGACAAATCATTTGGTTGTCCATCTGTTAGAGACCA
AAACAGGAGTATTTTTTCAGTTCATTGTAATGTACCCTTAGCCCATGATTTTACAAATAAAGAAAAGAAC
TTAGAGACAGATAATAAAATAAAACAAACCAGCAGTTCAGATAGCCATTCCTTAAATAATAAAATATTAA
ATAGAGAGGTGGTCAACTATGTACAGAAAAGGAATTCACAAATTTCTAATGAAAATGATTGTAATTTACA
GAGTTGTTCTTTAAGATCATCAGAGAATAGCATTAATCTTTCTATTGCCATGGATTTGTATTCTCCACCC
TTTGTCTATTTGTCTGTTCTAATGGCCAGCAAACCAAAGGAAGTTACAACAGTGAAAGTGAAAGCATTTA
TTGTAACCTTAACTGGAAATCTCTCAAGTTCTGGTGGTATTTGGAGTATAACTGCAAAGGTGTCTGATGG
TACTGCATATCTAGATGTAGACTTTGTGGATGAAATACTTACTAGCTTGATAGGGTTCTCAGTACCAGAA
ATGAAACAGTCAAAAAAGGATCCTCTTCAATACCAAAAGTTCCTGGAAGGGTTGCAGAAATGTCAAAGAG
ATCTAATAGATTTGTGCTGTCTAATGACTATTTCATTTAATCCTTCCTTGTCTAAAGCAATGGTACTGGC
ATTACAAGATGTTAATATGGAACACCTTGAGAATCTAAAGAAGCGGTTAAATAAATAA

Translation (625 aa):
MNVTSIALRAETWLLAAWHVKVPPMWLEACINWIQEENNNVNLSQAQMNKQVFEQWLLTDLRDLEHPLLP
DGILEIPKGELNGFYALQINSLVDVSQPAYSQIQKLRGKNTTNDLVTAEAQVTPKPWEAKPSRMLMLQLT
DGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVKVLGGEVDALLEEYAQEKVLARL
IGEPDLVVSVIPNNSNENIPRVTDVLDPALGPSDEELLASLDENDELTANNDTSSERCFTTGSSSNTIPT
RQSSFEPEFVISPRPKEEPSNLSIHVMDGELDDFSLEEALLLEETVQKEQMETKELQPLTFNRNADRSIE
RFSHNPNTTNNFSLTCKNGNNNWSEKNVSEQMTNEDKSFGCPSVRDQNRSIFSVHCNVPLAHDFTNKEKN
LETDNKIKQTSSSDSHSLNNKILNREVVNYVQKRNSQISNENDCNLQSCSLRSSENSINLSIAMDLYSPP
FVYLSVLMASKPKEVTTVKVKAFIVTLTGNLSSSGGIWSITAKVSDGTAYLDVDFVDEILTSLIGFSVPE
MKQSKKDPLQYQKFLEGLQKCQRDLIDLCCLMTISFNPSLSKAMVLALQDVNMEHLENLKKRLNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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