NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8034.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8034.2 Public Homo sapiens 11 ZBTB3 24 110 108 CCDS HistoryNCBI Gene:79842Re-query CCDS DB by CCDS ID:8034.2Re-query CCDS DB by GeneID:79842See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 8034.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394807.5 ENSP00000378286.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394807.5Link to Ensembl Protein Viewer:ENSP00000378286.4Re-query CCDS DB by Nucleotide ID:ENST00000394807Re-query CCDS DB by Protein ID:ENSP00000378286
Original member Current member NCBI NM_001363108.2 NP_001350037.1 Accepted alive Link to Nucleotide Sequence:NM_001363108.2Link to Protein Sequence:NP_001350037.1Re-query CCDS DB by Nucleotide ID:NM_001363108Re-query CCDS DB by Protein ID:NP_001350037Link to BLAST:NP_001350037.1
Original member Current member NCBI NM_001363109.2 NP_001350038.1 Accepted alive Link to Nucleotide Sequence:NM_001363109.2Link to Protein Sequence:NP_001350038.1Re-query CCDS DB by Nucleotide ID:NM_001363109Re-query CCDS DB by Protein ID:NP_001350038Link to BLAST:NP_001350038.1
Original member Current member NCBI NM_001370809.1 NP_001357738.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370809.1Link to Protein Sequence:NP_001357738.1Re-query CCDS DB by Nucleotide ID:NM_001370809Re-query CCDS DB by Protein ID:NP_001357738Link to BLAST:NP_001357738.1

Chromosomal Locations for CCDS 8034.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62752090 62753664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1575 nt):
ATGGAGTTCCCAGAACACAGTCAGCAGCTGCTGCAGAGCCTCCGGGAGCAGCGGTCCCAGGGTTTCCTTT
GTGACTGCACCGTGATGGTGGGTAGTACCCAGTTCTTGGCCCATCGGGCTGTGCTGGCCTCCTGCAGCCC
ATTCTTCCAGCTTTTCTACAAGGAGCGGGAATTGGACAAGAGGGATCTGGTGTGTATTCACAATGAAATT
GTCACAGCCCCAGCCTTTGGGCTGCTTCTGGACTTTATGTATGCTGGCCAGCTGACCCTGAGAGGGGATA
CCCCTGTGGAGGATGTGCTGGCAGCTGCCAGCTACTTGCACATGAATGACATCGTCAAGGTGTGTAAGCG
GCGGCTTCAAGCCCGGGCCCTGGCAGAGGCAGACAGTACCAAGAAGGAGGAGGAAACCAACTCACAGCTT
CCTAGTTTGGAGTTTTTGTCTAGTACTTCCCGTGGCACCCAACCTTCGTTGGCATCTGCTGAGACATCAG
GCCACTGGGGCAAAGGGGAATGGAAAGGCTCTGCTGCTCCCTCACCTACTGTCCGTCCTCCAGATGAGCC
ACCAATGTCTAGTGGGGCTGACACTACACAGCCTGGCATGGAGGTTGACGCACCACATCTGCGGGCACCT
CATCCACCAGTGGCTGATGTCTCTCTTGCCAGCCCTAGTAGCTCCACTGAGACCATTCCTACAAACTACT
TCTCTTCTGGCATCTCAGCAGTTTCATTGGAGCCACTGCCATCTCTTGATGTGGGTCCTGAGAGTCTGAG
GGTGGTGGAACCAAAGGATCCTGGAGGACCACTGCAAGGCTTCTATCCCCCAGCCTCAGCCCCAACGTCA
GCCCCAGCCCCTGTCTCAGCTCCAGTTCCATCCCAGGCTCCAGCCCCAGCTGAAGCTGAGCTGGTCCAGG
TGAAAGTTGAAGCTATTGTGATCTCTGATGAAGAGACTGATGTGTCAGATGAACAGCCTCAGGGTCCTGA
GAGAGCTTTCCCATCTGGAGGAGCAGTGTATGGGGCACAGCCCTCCCAGCCAGAGGCTTTTGAAGACCCA
GGGGCAGCAGGACTGGAGGAGGTGGGGCCAAGTGACCACTTCCTGCCAACAGACCCTCATCTACCCTACC
ATCTGCTGCCAGGTGCAGGGCAGTATCATCGAGGACTGGTGACCTCACCTCTGCCTGCACCCGCATCCCT
GCATGAGCCACTTTACCTGTCTTCTGAGTACGAAGCAGCTCCAGGAAGCTTTGGGGTTTTTACTGAGGAT
GTTCCCACCTGCAAGACATGTGGGAAGACCTTCTCATGCTCTTACACACTACGGCGACATGCCACGGTGC
ACACACGTGAGCGACCCTATGAGTGCCGCTACTGCCTGCGGAGCTACACGCAGTCAGGGGACCTCTACCG
CCACATCCGCAAGGCTCACAATGAGGACCTGGCCAAACGCAGCAAACCAGATCCAGAAGTGGGACCCCTT
CTAGGGGTGCAGCCTCTCCCTGGCTCCCCAACAGCAGACAGACAGAGCAGCAGTGGTGGAGGGCCACCTA
AAGATTTTGTATTGGCCCCAAAAACTAACATCTAA

Translation (524 aa):
MEFPEHSQQLLQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLASCSPFFQLFYKERELDKRDLVCIHNEI
VTAPAFGLLLDFMYAGQLTLRGDTPVEDVLAAASYLHMNDIVKVCKRRLQARALAEADSTKKEEETNSQL
PSLEFLSSTSRGTQPSLASAETSGHWGKGEWKGSAAPSPTVRPPDEPPMSSGADTTQPGMEVDAPHLRAP
HPPVADVSLASPSSSTETIPTNYFSSGISAVSLEPLPSLDVGPESLRVVEPKDPGGPLQGFYPPASAPTS
APAPVSAPVPSQAPAPAEAELVQVKVEAIVISDEETDVSDEQPQGPERAFPSGGAVYGAQPSQPEAFEDP
GAAGLEEVGPSDHFLPTDPHLPYHLLPGAGQYHRGLVTSPLPAPASLHEPLYLSSEYEAAPGSFGVFTED
VPTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRSYTQSGDLYRHIRKAHNEDLAKRSKPDPEVGPL
LGVQPLPGSPTADRQSSSGGGPPKDFVLAPKTNI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH