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Report for CCDS86706.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86706.1 Public Homo sapiens 19 ZNF563 24 110 108 CCDS HistoryNCBI Gene:147837Re-query CCDS DB by CCDS ID:86706.1Re-query CCDS DB by GeneID:147837See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86706.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000595977.5 ENSP00000469879.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595977.5Link to Ensembl Protein Viewer:ENSP00000469879.1Re-query CCDS DB by Nucleotide ID:ENST00000595977Re-query CCDS DB by Protein ID:ENSP00000469879
Original member Current member NCBI NM_001363608.1 NP_001350537.1 Accepted alive Link to Nucleotide Sequence:NM_001363608.1Link to Protein Sequence:NP_001350537.1Re-query CCDS DB by Nucleotide ID:NM_001363608Re-query CCDS DB by Protein ID:NP_001350537Link to BLAST:NP_001350537.1

Chromosomal Locations for CCDS 86706.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12319217 12319311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12319430 12319833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12321272 12321332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12322585 12322711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12333480 12333482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGGACGCAGTGGCCTTTGAGGATGTGGCTGTGAACTTCACCCAGGAGGAATGGGCTTTGCTGGGTCCAT
CACAGAAGAATTTATACAGATATGTGATGCAAGAAACCATCAGGAACCTGGACTGTATAAGAATGATATG
GGAAGAACAGAATACTGAAGATCAGTACAAAAATCCTAGGAGAAATCTAAGATGTCATATGGTAGAGAGA
TTCAGTGAAAGTAAAGACAGTAGTCAGTGTGGAGAAACATTTAGCCTCATTCGAGATAGTATTGTGAACA
ACAGCATTTGTCCTGGAGAAGATCCATGTCAAAGCGCTGAGTGTGAAGAAGTCATAATGGGTCATTTATC
CCTTAATAGCCACATCAGAGTTGATTCTGGACACAAACCACATGAGTATCAGGAATATGGAGAGAAGCCA
CATACACATAAACAACGTGGGAAAGCCTTCAGTTACCATCACTCCTTTCAGTCGCGTGGAAGGCCTCACA
CTGGAAAGAAACGCTATGAGTGTAAGGAATGTGGAAAAACCTTCAGTTCTCGTAGAAACCTTCGAAGACA
CATGGTAGTGCAAGGTGGAAATAGACCTTATAAATTTCCTATCGAAGACATGAGAGAATGCACACTGGGG
AGAAACCGTATGAATGTAAGCAGTGTTCTAAAGCCTTGCCTGATTCCAGTTCCTATATAA

Translation (229 aa):
MDAVAFEDVAVNFTQEEWALLGPSQKNLYRYVMQETIRNLDCIRMIWEEQNTEDQYKNPRRNLRCHMVER
FSESKDSSQCGETFSLIRDSIVNNSICPGEDPCQSAECEEVIMGHLSLNSHIRVDSGHKPHEYQEYGEKP
HTHKQRGKAFSYHHSFQSRGRPHTGKKRYECKECGKTFSSRRNLRRHMVVQGGNRPYKFPIEDMRECTLG
RNRMNVSSVLKPCLIPVPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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