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Report for CCDS12318.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12318.1 Public Homo sapiens 19 OR7A5 24 110 108 CCDS HistoryNCBI Gene:26659Re-query CCDS DB by CCDS ID:12318.1Re-query CCDS DB by GeneID:26659See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12318.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322301.5 ENSP00000316955.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322301.5Link to Ensembl Protein Viewer:ENSP00000316955.3Re-query CCDS DB by Nucleotide ID:ENST00000322301Re-query CCDS DB by Protein ID:ENSP00000316955
Original member Current member EBI ENST00000594432.1 ENSP00000471977.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594432.1Link to Ensembl Protein Viewer:ENSP00000471977.1Re-query CCDS DB by Nucleotide ID:ENST00000594432Re-query CCDS DB by Protein ID:ENSP00000471977
Original member Current member NCBI NM_001370480.1 NP_001357409.1 Accepted alive Link to Nucleotide Sequence:NM_001370480.1Link to Protein Sequence:NP_001357409.1Re-query CCDS DB by Nucleotide ID:NM_001370480Re-query CCDS DB by Protein ID:NP_001357409Link to BLAST:NP_001357409.1
Original member Current member NCBI NM_001370481.1 NP_001357410.1 Accepted alive Link to Nucleotide Sequence:NM_001370481.1Link to Protein Sequence:NP_001357410.1Re-query CCDS DB by Nucleotide ID:NM_001370481Re-query CCDS DB by Protein ID:NP_001357410Link to BLAST:NP_001357410.1
Original member Current member NCBI NM_001370482.1 NP_001357411.1 Accepted alive Link to Nucleotide Sequence:NM_001370482.1Link to Protein Sequence:NP_001357411.1Re-query CCDS DB by Nucleotide ID:NM_001370482Re-query CCDS DB by Protein ID:NP_001357411Link to BLAST:NP_001357411.1
Original member Current member NCBI NM_001370483.1 NP_001357412.1 Accepted alive Link to Nucleotide Sequence:NM_001370483.1Link to Protein Sequence:NP_001357412.1Re-query CCDS DB by Nucleotide ID:NM_001370483Re-query CCDS DB by Protein ID:NP_001357412Link to BLAST:NP_001357412.1
Original member Current member NCBI NM_017506.2 NP_059976.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017506.2Link to Protein Sequence:NP_059976.1Re-query CCDS DB by Nucleotide ID:NM_017506Re-query CCDS DB by Protein ID:NP_059976Link to BLAST:NP_059976.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357409.1 319 Q15622 319 100% 0 0
NP_001357410.1 319 Q15622 319 100% 0 0
NP_001357411.1 319 Q15622 319 100% 0 0
NP_001357412.1 319 Q15622 319 100% 0 0
NP_059976.1 319 Q15622 319 100% 0 0

Chromosomal Locations for CCDS 12318.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14827282 14828241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGGAACCAGGAAATGATACACAAATTTCAGAATTTCTTCTTCTGGGATTTTCACAAGAACCTGGACTGC
AACCCTTCCTCTTTGGGCTGTTCCTGTCCATGTACCTGGTCACTGTGCTCGGGAACCTGCTCATCATCCT
GGCCACAATCTCAGACTCCCACCTCCACACCCCCATGTACTTCTTCCTCTCCAACCTGTCCTTTGCTGAC
ATTTGTGTTACTTCCACCACCATTCCAAAAATGCTGATGAACATCCAGACACAGAACAAAGTCATCACCT
ACATAGCCTGCCTCATGCAGATGTATTTTTTCATACTCTTTGCTGGATTTGAAAACTTCCTCCTGTCCGT
GATGGCCTATGACCGGTTTGTGGCCATCTGTCACCCCCTGCACTACATGGTCATTATGAACCCTCACCTC
TGTGGACTGCTGGTTCTAGCATCCTGGACCATGAGTGCTCTGTATTCCTTGCTACAAATCTTAATGGTAG
TACGGCTGTCCTTCTGCACAGCCTTAGAAATCCCCCACTTTTTCTGTGAACTTAATCAGGTCATCCAACT
TGCTTGTTCTGATAGCTTTCTTAATCACATGGTGATATATTTTACAGTTGCGCTGCTGGGTGGAGGTCCC
CTGACTGGGATCCTTTACTCTTACTCTAAGATAATTTCTTCCATACATGCAATCTCATCAGCTCAGGGGA
AGTACAAGGCATTTTCCACCTGTGCATCTCACCTCTCAGTTGTCTCCTTATTTTATGGTGCAATCCTAGG
GGTGTACCTTAGTTCTGCTGCCACCCGCAACTCACACTCAAGTGCAACAGCCTCAGTGATGTACACTGTG
GTCACCCCCATGCTGAACCCCTTTATCTATAGTCTGAGGAATAAAGACATAAAGAGGGCTCTGGGAATAC
ATTTGTTGTGGGGAACAATGAAAGGGCAATTTTTCAAGAAGTGCCCATGA

Translation (319 aa):
MEPGNDTQISEFLLLGFSQEPGLQPFLFGLFLSMYLVTVLGNLLIILATISDSHLHTPMYFFLSNLSFAD
ICVTSTTIPKMLMNIQTQNKVITYIACLMQMYFFILFAGFENFLLSVMAYDRFVAICHPLHYMVIMNPHL
CGLLVLASWTMSALYSLLQILMVVRLSFCTALEIPHFFCELNQVIQLACSDSFLNHMVIYFTVALLGGGP
LTGILYSYSKIISSIHAISSAQGKYKAFSTCASHLSVVSLFYGAILGVYLSSAATRNSHSSATASVMYTV
VTPMLNPFIYSLRNKDIKRALGIHLLWGTMKGQFFKKCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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