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Report for CCDS75386.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75386.1 Public Homo sapiens 6 SERPINB6 24 110 108 CCDS HistoryNCBI Gene:5269Re-query CCDS DB by CCDS ID:75386.1Re-query CCDS DB by GeneID:5269See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75386.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616722.4 ENSP00000481398.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616722.4Link to Ensembl Protein Viewer:ENSP00000481398.1Re-query CCDS DB by Nucleotide ID:ENST00000616722Re-query CCDS DB by Protein ID:ENSP00000481398
Original member Current member EBI ENST00000645580.1 ENSP00000495362.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645580.1Link to Ensembl Protein Viewer:ENSP00000495362.1Re-query CCDS DB by Nucleotide ID:ENST00000645580Re-query CCDS DB by Protein ID:ENSP00000495362
Original member Current member NCBI NM_001195291.3 NP_001182220.2 Accepted alive Link to Nucleotide Sequence:NM_001195291.3Link to Protein Sequence:NP_001182220.2Re-query CCDS DB by Nucleotide ID:NM_001195291Re-query CCDS DB by Protein ID:NP_001182220Link to BLAST:NP_001182220.2
Original member Current member NCBI NM_001374515.1 NP_001361444.1 Accepted alive Link to Nucleotide Sequence:NM_001374515.1Link to Protein Sequence:NP_001361444.1Re-query CCDS DB by Nucleotide ID:NM_001374515Re-query CCDS DB by Protein ID:NP_001361444Link to BLAST:NP_001361444.1

Chromosomal Locations for CCDS 75386.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 2948298 2948699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 2948914 2949069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 2953044 2953186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 2954592 2954709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 2955524 2955670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 2959168 2959342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 2968779 2968780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGTCTGCCATCATGGATGTTCTCGCAGAAGCAAATGGCACCTTTGCCTTAAACCTTTTGAAAACGCTGG
GT
AAAGACAACTCGAAGAATGTGTTTTTCTCACCCATGAGCATGTCCTGTGCCCTGGCCATGGTCTACAT
G
GGGGCAAAGGGAAACACCGCTGCACAGATGGCCCAGATACTTTCTTTCAATAAAAGTGGCGGTGGTGGA
GAC
ATCCACCAGGGCTTCCAGTCTCTTCTCACCGAAGTGAACAAGACTGGCACGCAGTACTTGCTTAGGA
TG
GCCAACAGGCTCTTTGGGGAAAAGTCTTGTGATTTCCTCTCATCTTTTAGAGATTCCTGCCAAAAATT
C
TACCAAGCAGAGATGGAGGAGCTTGACTTTATCAGCGCCGTAGAGAAGTCCAGAAAACACATAAACACC
TGG
GTAGCTGAAAAGACAGAAGGTAAAATTGCGGAGTTGCTCTCTCCGGGCTCAGTGGATCCATTGACAA
GG
CTGGTTCTGGTGAATGCTGTCTATTTCAGAGGAAACTGGGATGAACAGTTTGACAAGGAGAACACCGA
G
GAGAGACTGTTTAAAGTCAGCAAGAATGAGGAGAAACCTGTGCAAATGATGTTTAAGCAATCTACTTTT
AAG
AAGACCTATATAGGAGAAATATTTACCCAAATCTTGGTGCTTCCATATGTTGGCAAGGAACTGAATA
TG
ATCATCATGCTTCCGGACGAGACCACTGACTTGAGAACGGTGGAGAAAGAACTCACTTACGAGAAGTT
C
GTAGAATGGACGAGGCTGGACATGATGGATGAAGAGGAGGTGGAAGTGTCCCTCCCGCGGTTTAAACTA
GAG
GAAAGCTACGACATGGAGAGTGTCCTGCGCAACCTGGGCATGACTGATGCCTTCGAGCTGGGCAAGG
CA
GACTTCTCTGGAATGTCCCAGACAGACCTGTCTCTGTCCAAGGTCGTGCACAAGTCTTTTGTGGAGGT
C
AATGAGGAAGGCACGGAGGCTGCAGCCGCCACAGCTGCCATCATGATGATGCGGTGTGCCAGATTCGTC
CCC
CGCTTCTGCGCCGACCACCCCTTCCTTTTCTTCATCCAGCACAGCAAGACCAACGGGATTCTCTTCT
GC
GGCCGCTTTTCCTCTCCGTGA


Translation (380 aa):
MSAIMDVLAEANGTFALNLLKTLGKDNSKNVFFSPMSMSCALAMVYMGAKGNTAAQMAQILSFNKSGGGG
D
IHQGFQSLLTEVNKTGTQYLLRMANRLFGEKSCDFLS
SFRDSCQKFYQAEMEELDFISAVEKSRKHINT
W
VAEKTE
GKIAELLSPGSVDPLTRLVLVNAVYFRGNWDEQFDKENTEERLFKVSKNEEKPVQMMFKQSTF
K
KTYIGEIFTQILVLPYVGKELNMIIMLPDETTDLRT
VEKELTYEKFVEWTRLDMMDEEEVEVSLPRFKL
E
ESYDMESVLRNLGMTDAFELGKADFSGMSQTDLSLSKVVHKSFVEVNEEGTEAAAATAAIMMMRCARFV
P
RFCADHPFLFFIQHSKTNGILFCGRFSSP




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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