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Report for CCDS43738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43738.1 Public Homo sapiens 8 UBE2V2 24 110 108 CCDS HistoryNCBI Gene:7336Re-query CCDS DB by CCDS ID:43738.1Re-query CCDS DB by GeneID:7336See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523111.7 ENSP00000428209.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000523111.7Link to Ensembl Protein Viewer:ENSP00000428209.1Re-query CCDS DB by Nucleotide ID:ENST00000523111Re-query CCDS DB by Protein ID:ENSP00000428209
Original member Current member NCBI NM_003350.3 NP_003341.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003350.3Link to Protein Sequence:NP_003341.1Re-query CCDS DB by Nucleotide ID:NM_003350Re-query CCDS DB by Protein ID:NP_003341Link to BLAST:NP_003341.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003341.1 145 Q15819 145 100% 0 0

Chromosomal Locations for CCDS 43738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 48008455 48008470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 48043033 48043181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 48049853 48049978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 48060682 48060828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGCGGTCTCCACAGGAGTTAAAGTTCCTCGTAATTTTCGCTTGTTGGAAGAACTTGAAGAAGGACAAA
AAGGAGTAGGCGACGGTACAGTTAGCTGGGGCCTTGAAGATGATGAAGATATGACACTTACAAGGTGGAC
AGGCATGATTATTGGGCCACCAAGGACAAATTATGAAAACAGAATATATAGCCTGAAAGTAGAATGTGGA
CCTAAATACCCAGAAGCTCCTCCGTCAGTTAGATTTGTAACAAAAATTAATATGAACGGAATAAATAATT
CCAGTGGGATGGTGGATGCCCGGAGCATACCAGTGTTAGCAAAATGGCAAAATTCATATAGCATTAAAGT
TGTACTTCAAGAGCTAAGACGTCTAATGATGTCCAAAGAAAATATGAAGCTTCCACAGCCACCAGAAGGA
CAAACATACAACAATTAA

Translation (145 aa):
MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECG
PKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG
QTYNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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