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Report for CCDS10504.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10504.1 Public Homo sapiens 16 ZNF174 24 110 108 CCDS HistoryNCBI Gene:7727Re-query CCDS DB by CCDS ID:10504.1Re-query CCDS DB by GeneID:7727See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10504.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268655.5 ENSP00000268655.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268655.5Link to Ensembl Protein Viewer:ENSP00000268655.4Re-query CCDS DB by Nucleotide ID:ENST00000268655Re-query CCDS DB by Protein ID:ENSP00000268655
Original member Current member EBI ENST00000571936.5 ENSP00000460397.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571936.5Link to Ensembl Protein Viewer:ENSP00000460397.1Re-query CCDS DB by Nucleotide ID:ENST00000571936Re-query CCDS DB by Protein ID:ENSP00000460397
Original member Current member NCBI NM_001347868.2 NP_001334797.1 Accepted alive Link to Nucleotide Sequence:NM_001347868.2Link to Protein Sequence:NP_001334797.1Re-query CCDS DB by Nucleotide ID:NM_001347868Re-query CCDS DB by Protein ID:NP_001334797Link to BLAST:NP_001334797.1
Original member Current member NCBI NM_003450.3 NP_003441.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003450.3Link to Protein Sequence:NP_003441.1Re-query CCDS DB by Nucleotide ID:NM_003450Re-query CCDS DB by Protein ID:NP_003441Link to BLAST:NP_003441.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334797.1 407 Q15697-1 407 100% 0 0
NP_003441.1 407 Q15697-1 407 100% 0 0

Chromosomal Locations for CCDS 10504.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3402005 3402406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3404426 3404648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3408321 3408919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGGCAGCTAAAATGGAGATAACTTTAAGCTCCAACACTGAAGCTTCCTCCAAGCAAGAGAGACACATAA
TAGCCAAACTAGAAGAGAAACGGGGCCCTCCTCTGCAAAAAAACTGCCCAGATCCTGAGCTCTGCCGCCA
GAGCTTCAGACGCTTTTGTTATCAAGAGGTGTCTGGACCCCAAGAGGCTCTCTCCCAGCTCCGACAGCTC
TGCCGTCAGTGGTTGCAACCCGAGCTGCACACCAAGGAGCAGATTTTGGAGCTTCTGGTGATGGAGCAGT
TCCTGACCATCCTGCCCCCGGAGATCCAGGCTCGGGTCAGGCATCGATGTCCAATGAGCAGCAAGGAGAT
TGTGACCCTCGTGGAAGATTTTCACAGAGCATCCAAGAAACCAAAGCAGTGGGTGGCCGTTTGTATGCAG
GGGCAAAAGGTGCTCTTGGAGAAAACTGGATCTCAGCTTGGAGAACAGGAACTGCCAGACTTTCAACCGC
AGACTCCTAGGAGAGATCTCAGGGAGAGCTCTCCAGCAGAGCCTTCCCAGGCAGGAGCTTATGACCGGCT
GAGCCCCCATCATTGGGAGAAATCCCCACTCCTCCAAGAACCAACCCCCAAATTGGCTGGGACAGAGGCC
CCCAGAATGAGAAGTGACAACAAGGAAAATCCACAACAGGAAGGGGCTAAAGGAGCAAAGCCATGTGCAG
TGTCAGCTGGCAGATCCAAAGGGAATGGTCTGCAGAATCCTGAACCAAGAGGGGCAAATATGAGTGAACC
TCGGTTGTCACGGAGGCAGGTCAGCTCCCCAAATGCTCAAAAGCCATTTGCTCACTACCAGAGACATTGC
AGGGTGGAATACATCAGCAGCCCCCTAAAAAGCCACCCACTGAGAGAGCTAAAGAAAAGCAAAGGAGGTA
AACGGAGTCTGAGCAACCGTTTGCAACATCTTGGTCACCAGCCCACCCGCTCAGCAAAGAAACCCTACAA
ATGTGATGACTGTGGGAAAAGCTTCACGTGGAATTCAGAGCTGAAGAGACACAAGAGAGTCCACACAGGA
GAGAGACCCTACACGTGCGGAGAGTGTGGAAACTGCTTTGGGCGGCAGTCAACCCTGAAGCTGCACCAGA
GGATCCACACTGGAGAGAAGCCATACCAGTGTGGCCAGTGTGGGAAAAGCTTTCGCCAGAGCTCAAACCT
TCACCAGCATCACCGACTTCACCATGGGGACTAA

Translation (407 aa):
MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPELCRQSFRRFCYQEVSGPQEALSQLRQL
CRQWLQPELHTKEQILELLVMEQFLTILPPEIQARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQ
GQKVLLEKTGSQLGEQELPDFQPQTPRRDLRESSPAEPSQAGAYDRLSPHHWEKSPLLQEPTPKLAGTEA
PRMRSDNKENPQQEGAKGAKPCAVSAGRSKGNGLQNPEPRGANMSEPRLSRRQVSSPNAQKPFAHYQRHC
RVEYISSPLKSHPLRELKKSKGGKRSLSNRLQHLGHQPTRSAKKPYKCDDCGKSFTWNSELKRHKRVHTG
ERPYTCGECGNCFGRQSTLKLHQRIHTGEKPYQCGQCGKSFRQSSNLHQHHRLHHGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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