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Report for CCDS3709.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3709.1 Public Homo sapiens 4 PRSS12 24 110 108 CCDS HistoryNCBI Gene:8492Re-query CCDS DB by CCDS ID:3709.1Re-query CCDS DB by GeneID:8492See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3709.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296498.3 ENSP00000296498.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296498.3Link to Ensembl Protein Viewer:ENSP00000296498.3Re-query CCDS DB by Nucleotide ID:ENST00000296498Re-query CCDS DB by Protein ID:ENSP00000296498
Original member Current member NCBI NM_003619.4 NP_003610.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003619.4Link to Protein Sequence:NP_003610.2Re-query CCDS DB by Nucleotide ID:NM_003619Re-query CCDS DB by Protein ID:NP_003610Link to BLAST:NP_003610.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003610.2 875 P56730 875 100% 0 0

Chromosomal Locations for CCDS 3709.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 118281936 118282243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118282831 118283111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118294939 118295061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118295778 118295856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118298733 118298938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118308436 118308577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118313201 118313397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118316182 118316323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118318378 118318556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118331716 118331866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118335473 118335651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118338176 118338314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 118352219 118352720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2628 nt):
ATGACGCTCGCCCGCTTCGTGCTAGCCCTGATGTTAGGGGCGCTCCCCGAAGTGGTCGGCTTTGATTCTG
TCCTCAATGATTCCCTCCACCACAGCCACCGCCATTCGCCCCCTGCGGGTCCGCACTACCCCTATTACCT
TCCCACCCAGCAGCGGCCCCCGAGGACGCGTCCGCCGCCGCCTCTCCCGCGCTTCCCGCGCCCCCCGCGG
GCGCTCCCTGCCCAGCGCCCGCACGCCCTCCAGGCCGGGCACACGCCCCGGCCGCACCCCTGGGGCTGCC
CCGCCGGCGAGCCATGGGTCAGCGTGACGGACTTCGGCGCCCCGTGTCTGCGGTGGGCGGAGGTGCCACC
CTTCCTGGAGCGGTCGCCCCCAGCGAGCTGGGCTCAGCTGCGAGGACAGCGCCACAACTTTTGTCGGAGC
CCCGACGGCGCGGGCAGACCCTGGTGTTTCTACGGAGACGCCCGTGGCAAGGTGGACTGGGGCTACTGCG
ACTGCAGACACGGATCAGTACGACTTCGTGGCGGCAAAAATGAGTTTGAAGGCACAGTGGAAGTATATGC
AAGTGGAGTTTGGGGCACTGTCTGTAGCAGCCACTGGGATGATTCTGATGCATCAGTCATTTGTCACCAG
CTGCAGCTGGGAGGAAAAGGAATAGCAAAACAAACCCCGTTTTCTGGACTGGGCCTTATTCCCATTTATT
GGAGCAATGTCCGTTGCCGAGGAGATGAAGAAAATATACTGCTTTGTGAAAAAGACATCTGGCAGGGTGG
GGTGTGTCCTCAGAAGATGGCAGCTGCTGTCACGTGTAGCTTTTCCCATGGCCCAACGTTCCCCATCATT
CGCCTTGCTGGAGGCAGCAGTGTGCATGAAGGCCGGGTGGAGCTCTACCATGCTGGCCAGTGGGGAACCG
TTTGTGATGACCAATGGGATGATGCCGATGCAGAAGTGATCTGCAGGCAGCTGGGCCTCAGTGGCATTGC
CAAAGCATGGCATCAGGCATATTTTGGGGAAGGGTCTGGCCCAGTTATGTTGGATGAAGTACGCTGCACT
GGGAATGAGCTTTCAATTGAGCAGTGTCCAAAGAGCTCCTGGGGAGAGCATAACTGTGGCCATAAAGAAG
ATGCTGGAGTGTCCTGTACCCCTCTAACAGATGGGGTCATCAGACTTGCAGGTGGGAAAGGCAGCCATGA
GGGTCGCTTGGAGGTATATTACAGAGGCCAGTGGGGAACTGTCTGTGATGATGGCTGGACTGAGCTGAAT
ACATACGTGGTTTGTCGACAATTGGGATTTAAATATGGTAAACAAGCATCTGCCAACCATTTTGAAGAAA
GCACAGGGCCCATATGGTTGGATGACGTCAGCTGCTCAGGAAAGGAAACCAGATTTCTTCAGTGTTCCAG
GCGACAGTGGGGAAGGCATGACTGCAGCCACCGCGAAGATGTTAGCATTGCCTGCTACCCTGGCGGCGAG
GGACACAGGCTCTCTCTGGGTTTTCCTGTCAGACTGATGGATGGAGAAAATAAGAAAGAAGGACGAGTGG
AGGTTTTTATCAATGGCCAGTGGGGAACAATCTGTGATGATGGATGGACTGATAAGGATGCAGCTGTGAT
CTGTCGTCAGCTTGGCTACAAGGGTCCTGCCAGAGCAAGAACCATGGCTTACTTTGGAGAAGGAAAAGGA
CCCATCCATGTGGATAATGTGAAGTGCACAGGAAATGAGAGGTCCTTGGCTGACTGTATCAAGCAAGATA
TTGGAAGACACAACTGCCGCCACAGTGAAGATGCAGGAGTTATTTGTGATTATTTTGGCAAGAAGGCCTC
AGGTAACAGTAATAAAGAGTCCCTCTCATCTGTTTGTGGCTTGAGATTACTGCACCGTCGGCAGAAGCGG
ATCATTGGTGGGAAAAATTCTTTAAGGGGTGGTTGGCCTTGGCAGGTTTCCCTCCGGCTGAAGTCATCCC
ATGGAGATGGCAGGCTCCTCTGCGGGGCTACGCTCCTGAGTAGCTGCTGGGTCCTCACAGCAGCACACTG
TTTCAAGAGGTATGGCAACAGCACTAGGAGCTATGCTGTTAGGGTTGGAGATTATCATACTCTGGTACCA
GAGGAGTTTGAGGAAGAAATTGGAGTTCAACAGATTGTGATTCATCGGGAGTATCGACCCGACCGCAGTG
ATTATGACATAGCCCTGGTTAGATTACAAGGACCAGAAGAGCAATGTGCCAGATTCAGCAGCCATGTTTT
GCCAGCCTGTTTACCACTCTGGAGAGAGAGGCCACAGAAAACAGCATCCAACTGTTACATAACAGGATGG
GGTGACACAGGACGAGCCTATTCAAGAACACTACAACAAGCAGCCATTCCCTTACTTCCTAAAAGGTTTT
GTGAAGAACGTTATAAGGGTCGGTTTACAGGGAGAATGCTTTGTGCTGGAAACCTCCATGAACACAAACG
CGTGGACAGCTGCCAGGGAGACAGCGGAGGACCACTCATGTGTGAACGGCCCGGAGAGAGCTGGGTGGTG
TATGGGGTGACCTCCTGGGGGTATGGCTGTGGAGTCAAGGATTCTCCTGGTGTTTATACCAAAGTCTCAG
CCTTTGTACCTTGGATAAAAAGTGTCACCAAACTGTAA

Translation (875 aa):
MTLARFVLALMLGALPEVVGFDSVLNDSLHHSHRHSPPAGPHYPYYLPTQQRPPRTRPPPPLPRFPRPPR
ALPAQRPHALQAGHTPRPHPWGCPAGEPWVSVTDFGAPCLRWAEVPPFLERSPPASWAQLRGQRHNFCRS
PDGAGRPWCFYGDARGKVDWGYCDCRHGSVRLRGGKNEFEGTVEVYASGVWGTVCSSHWDDSDASVICHQ
LQLGGKGIAKQTPFSGLGLIPIYWSNVRCRGDEENILLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPII
RLAGGSSVHEGRVELYHAGQWGTVCDDQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCT
GNELSIEQCPKSSWGEHNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELN
TYVVCRQLGFKYGKQASANHFEESTGPIWLDDVSCSGKETRFLQCSRRQWGRHDCSHREDVSIACYPGGE
GHRLSLGFPVRLMDGENKKEGRVEVFINGQWGTICDDGWTDKDAAVICRQLGYKGPARARTMAYFGEGKG
PIHVDNVKCTGNERSLADCIKQDIGRHNCRHSEDAGVICDYFGKKASGNSNKESLSSVCGLRLLHRRQKR
IIGGKNSLRGGWPWQVSLRLKSSHGDGRLLCGATLLSSCWVLTAAHCFKRYGNSTRSYAVRVGDYHTLVP
EEFEEEIGVQQIVIHREYRPDRSDYDIALVRLQGPEEQCARFSSHVLPACLPLWRERPQKTASNCYITGW
GDTGRAYSRTLQQAAIPLLPKRFCEERYKGRFTGRMLCAGNLHEHKRVDSCQGDSGGPLMCERPGESWVV
YGVTSWGYGCGVKDSPGVYTKVSAFVPWIKSVTKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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