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Report for CCDS23930.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23930.1 Public Mus musculus 10 Ddt 23 108 98 CCDS HistoryNCBI Gene:13202Re-query CCDS DB by CCDS ID:23930.1Re-query CCDS DB by GeneID:13202See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23930.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001716.7 ENSMUSP00000001716.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001716.7Link to Ensembl Protein Viewer:ENSMUSP00000001716.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000001716Re-query CCDS DB by Protein ID:ENSMUSP00000001716
Original member Current member NCBI NM_010027.1 NP_034157.1 Accepted alive Link to Nucleotide Sequence:NM_010027.1Link to Protein Sequence:NP_034157.1Re-query CCDS DB by Nucleotide ID:NM_010027Re-query CCDS DB by Protein ID:NP_034157Link to BLAST:NP_034157.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034157.1 118 O35215 118 100% 0 0

Chromosomal Locations for CCDS 23930.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75771434 75771506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75772738 75772913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75773216 75773323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (357 nt):
ATGCCATTCGTTGAGTTGGAAACAAACTTGCCGGCTAGCCGCATACCCGCGGGGCTGGAGAACCGGCTGT
GTGCGGCCACAGCCACCATCCTGGACAAACCCGAAGACCGCGTGAGCGTTACGATACGACCTGGCATGAC
CCTGTTGATGAACAAATCCACAGAGCCTTGTGCTCACCTTCTGGTCTCTTCCATCGGGGTTGTGGGCACC
GCGGAGCAGAACCGCACTCACAGCGCCAGCTTCTTCAAGTTCCTCACCGAGGAGCTGTCCCTGGACCAGG
ACCGGATCGTTATCCGCTTCTTCCCCTTGGAGGCTTGGCAGATCGGAAAGAAAGGAACTGTCATGACATT
TCTGTGA

Translation (118 aa):
MPFVELETNLPASRIPAGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAHLLVSSIGVVGT
AEQNRTHSASFFKFLTEELSLDQDRIVIRFFPLEAWQIGKKGTVMTFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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