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Report for CCDS20968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20968.1 Public Mus musculus 7 Rabac1 23 108 98 CCDS HistoryNCBI Gene:14470Re-query CCDS DB by CCDS ID:20968.1Re-query CCDS DB by GeneID:14470See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20968.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076961.8 ENSMUSP00000076227.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076961.8Link to Ensembl Protein Viewer:ENSMUSP00000076227.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000076961Re-query CCDS DB by Protein ID:ENSMUSP00000076227
Original member Current member NCBI NM_010261.2 NP_034391.1 Accepted alive Link to Nucleotide Sequence:NM_010261.2Link to Protein Sequence:NP_034391.1Re-query CCDS DB by Nucleotide ID:NM_010261Re-query CCDS DB by Protein ID:NP_034391Link to BLAST:NP_034391.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034391.1 185 Q9Z0S9 185 100% 0 0

Chromosomal Locations for CCDS 20968.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 24969921 24970009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24970087 24970188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24971761 24971858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24972102 24972314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 24972527 24972582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (558 nt):
ATGGCGGCCCAGAAGGACCAGCAGAAGGATGCCGAAGGGGAAGGGCTGAGCGCCACGACCCTGCTGCCCA
AGCTGATTCCATCCGGCGCAGGCCGAGAGTGGCTGGAGCGGCGCCGGGCGACCATCCGGCCCTGGGGCAC
CTTCGTGGACCAGCAACGTTTCTCGCGACCCCGCAATGTGGGAGAGCTTTGCCAGCGCCTGGTACGCAAC
GTGGAGTATTATCAAAGCAACTACGTGTTCGTGTTTCTCGGCCTCATCCTGTACTGCGTGGTGACATCTC
CCATGCTGCTGGTGGCTCTGGCTGTCTTCTTTGGCGCCTGTTACATTCTCTATCTGCGCACGTTGCAGTC
TAAGCTTGTACTCTTTGGCCGGGAGGTGAGCCCAGCACATCAGTATGCCCTGGCTGGTGGCGTCTCTTTC
CCCTTCTTCTGGCTGGCCGGTGCTGGCTCTGCTGTCTTCTGGGTCCTGGGAGCCACGCTGGTACTCATAG
GCTCCCACGCTGCCTTCCACCAGATGGAGCCTGCAGATGGCGAGGAGCTGCAGATGGAACCTGTGTAA

Translation (185 aa):
MAAQKDQQKDAEGEGLSATTLLPKLIPSGAGREWLERRRATIRPWGTFVDQQRFSRPRNVGELCQRLVRN
VEYYQSNYVFVFLGLILYCVVTSPMLLVALAVFFGACYILYLRTLQSKLVLFGREVSPAHQYALAGGVSF
PFFWLAGAGSAVFWVLGATLVLIGSHAAFHQMEPADGEELQMEPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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