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Report for CCDS5741.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5741.1 Public Homo sapiens 7 HBP1 24 110 108 CCDS HistoryNCBI Gene:26959Re-query CCDS DB by CCDS ID:5741.1Re-query CCDS DB by GeneID:26959See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5741.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222574.9 ENSP00000222574.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222574.9Link to Ensembl Protein Viewer:ENSP00000222574.4Re-query CCDS DB by Nucleotide ID:ENST00000222574Re-query CCDS DB by Protein ID:ENSP00000222574
Original member Current member EBI ENST00000485846.5 ENSP00000418738.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000485846.5Link to Ensembl Protein Viewer:ENSP00000418738.1Re-query CCDS DB by Nucleotide ID:ENST00000485846Re-query CCDS DB by Protein ID:ENSP00000418738
Original member Current member EBI ENST00000468410.5 ENSP00000420500.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000468410.5Link to Ensembl Protein Viewer:ENSP00000420500.1Re-query CCDS DB by Nucleotide ID:ENST00000468410Re-query CCDS DB by Protein ID:ENSP00000420500
Original member Current member NCBI NM_012257.4 NP_036389.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012257.4Link to Protein Sequence:NP_036389.2Re-query CCDS DB by Nucleotide ID:NM_012257Re-query CCDS DB by Protein ID:NP_036389Link to BLAST:NP_036389.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036389.2 514 O60381-1 514 100% 0 0

Chromosomal Locations for CCDS 5741.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107179894 107180062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107182373 107182601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107185801 107185942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107186361 107186472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107186569 107186681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107189292 107189448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107190173 107190317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107195834 107196151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107200160 107200301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107201414 107201431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGTGTGGGAAGTGAAGACAAATCAGATGCCTAATGCAGTACAGAAACTCCTGTTGGTGATGGACAAGA
GAGCCTCAGGAATGAATGACTCATTGGAGTTGCTGCAGTGTAATGAGAATTTGCCATCTTCACCTGGATA
TAACTCCTGTGATGAACACATGGAGCTTGATGACCTTCCTGAACTTCAGGCAGTTCAAAGTGATCCTACC
CAATCTGGCATGTACCAGCTGAGTTCAGATGTTTCACATCAAGAATACCCAAGATCATCTTGGAACCAAA
ATACCTCAGACATACCAGAAACTACTTACCGTGAAAATGAGGTGGACTGGCTAACAGAATTGGCAAATAT
CGCGACCAGTCCACAAAGTCCACTGATGCAGTGCTCATTTTACAATAGATCATCTCCTGTACACATCATA
GCCACTAGCAAAAGTTTACATTCCTATGCACGCCCTCCACCAGTGTCCTCTTCTTCGAAGAGTGAACCAG
CCTTCCCTCATCACCATTGGAAGGAGGAAACACCAGTAAGACACGAAAGGGCAAATAGTGAGTCAGAATC
TGGCATTTTCTGCATGTCCTCCCTGTCAGATGATGATGATTTGGGATGGTGCAATTCCTGGCCTTCAACT
GTCTGGCACTGTTTTTTGAAAGGCACACGACTGTGCTTTCATAAGGGAAGCAATAAGGAATGGCAAGATG
TTGAAGATTTTGCTAGAGCTGAAGGCTGTGATAATGAGGAAGATCTTCAAATGGGCATTCACAAGGGCTA
TGGTTCTGATGGTCTAAAGTTGTTATCACATGAAGAAAGTGTATCATTTGGCGAGTCTGTACTGAAGTTG
ACTTTTGATCCTGGTACAGTAGAAGATGGTTTACTTACCGTAGAGTGTAAGCTGGACCACCCTTTCTATG
TTAAAAATAAAGGTTGGTCATCATTTTATCCAAGCTTGACTGTGGTACAGCATGGCATTCCATGTTGTGA
AGTTCATATTGGCGATGTATGTCTACCTCCTGGACACCCCGATGCCATTAATTTTGATGATTCAGGTGTT
TTTGATACATTTAAAAGCTATGACTTCACACCTATGGATTCTTCTGCAGTTTATGTGTTAAGTAGTATGG
CTCGCCAGCGTCGTGCATCTTTGTCTTGTGGAGGACCTGGTGGTCAAGACTTTGCAAGATCTGGATTCAG
TAAAAACTGTGGCTCACCTGGATCATCACAGCTCTCTTCCAATTCTTTGTATGCTAAAGCTGTCAAAAAC
CACAGCTCAGGGACTGTGAGTGCCACTTCTCCTAATAAGTGCAAAAGACCAATGAATGCCTTCATGCTTT
TTGCCAAAAAATACAGAGTTGAATATACTCAGATGTATCCAGGGAAAGATAACAGAGCCATAAGTGTGAT
CCTTGGTGACAGGTGGAAGAAAATGAAGAATGAAGAGAGAAGAATGTACACATTAGAAGCAAAGGCTTTG
GCTGAAGAACAGAAACGTTTAAATCCTGACTGTTGGAAGAGGAAAAGAACCAATTCAGGCTCACAACAAC
ATTAA

Translation (514 aa):
MVWEVKTNQMPNAVQKLLLVMDKRASGMNDSLELLQCNENLPSSPGYNSCDEHMELDDLPELQAVQSDPT
QSGMYQLSSDVSHQEYPRSSWNQNTSDIPETTYRENEVDWLTELANIATSPQSPLMQCSFYNRSSPVHII
ATSKSLHSYARPPPVSSSSKSEPAFPHHHWKEETPVRHERANSESESGIFCMSSLSDDDDLGWCNSWPST
VWHCFLKGTRLCFHKGSNKEWQDVEDFARAEGCDNEEDLQMGIHKGYGSDGLKLLSHEESVSFGESVLKL
TFDPGTVEDGLLTVECKLDHPFYVKNKGWSSFYPSLTVVQHGIPCCEVHIGDVCLPPGHPDAINFDDSGV
FDTFKSYDFTPMDSSAVYVLSSMARQRRASLSCGGPGGQDFARSGFSKNCGSPGSSQLSSNSLYAKAVKN
HSSGTVSATSPNKCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKAL
AEEQKRLNPDCWKRKRTNSGSQQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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