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Report for CCDS9634.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
9634.1 |
Public |
Homo sapiens |
14 |
STXBP6 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:29091](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:9634.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:29091](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 14 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 9634.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000323944.10 |
ENSP00000324302.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000323944.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000324302.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000323944](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000324302](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000396700.5 |
ENSP00000379928.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000396700.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000379928.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000396700](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000379928](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000419632.6 |
ENSP00000397212.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000419632.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000397212.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000419632](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000397212](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000550887.5 |
ENSP00000449379.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000550887.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000449379.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000550887](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000449379](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000546511.5 |
ENSP00000449536.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000546511.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000449536.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000546511](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000449536](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001304476.3 |
NP_001291405.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001304476.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001291405.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001304476](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001291405](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001291405.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001304477.3 |
NP_001291406.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001304477.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001291406.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001304477](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001291406](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001291406.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351940.3 |
NP_001338869.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351940.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338869.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351940](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338869](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338869.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351941.3 |
NP_001338870.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351941.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338870.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351941](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338870](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338870.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351942.3 |
NP_001338871.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351942.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338871.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351942](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338871](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338871.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001351943.3 |
NP_001338872.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001351943.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001338872.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001351943](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001338872](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001338872.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394410.1 |
NP_001381339.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394410.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381339.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394410](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381339](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381339.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394411.1 |
NP_001381340.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394411.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381340.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394411](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381340](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381340.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394412.1 |
NP_001381341.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394412.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381341.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394412](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381341](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381341.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394413.1 |
NP_001381342.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394413.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381342.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394413](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381342](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381342.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394414.1 |
NP_001381343.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394414.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381343.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394414](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381343](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381343.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394415.1 |
NP_001381344.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394415.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381344.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394415](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381344](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381344.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001394416.1 |
NP_001381345.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001394416.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381345.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001394416](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381345](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381345.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014178.9 |
NP_054897.4 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014178.9](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_054897.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014178](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_054897](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_054897.4](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 9634.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (633 nt): ATGAGTGCCAAATCTGCTATCAGCAAGGAAATTTTTGCACCTCTTGATGAAAGGATGCTGGGAGCTGTCC AAGTCAAGAGGAGGACAAAGAAAAAGATTCCTTTCTTGGCAACTGGAGGTCAAGGCGAATATTTAACTTA TATCTGCCTGTCAGTGACAAACAAGAAACCCACACAGGCGTCCATCACAAAGGTCAAACAGTTTGAAGGC TCCACATCATTTGTTCGGAGATCACAGTGGATGCTCGAGCAGCTTCGCCAGGTTAATGGTATCGATCCTA ATGGGGATTCGGCAGAGTTTGATTTGTTGTTTGAAAATGCTTTTGACCAGTGGGTAGCCAGCACAGCGTC AGAAAAATGCACCTTCTTCCAGATCCTCCACCATACCTGCCAGAGGTACCTCACGGACAGGAAGCCAGAG TTTATTAACTGCCAATCCAAAATTATGGGAGGAAACAGCATCCTCCATTCAGCTGCTGACAGCGTGACCA GCGCAGTGCAGAAGGCAAGCCAGGCCTTGAATGAGCGTGGAGAGCGATTAGGCCGAGCAGAGGAGAAGAC AGAAGACCTGAAGAACAGCGCCCAGCAGTTTGCAGAAACTGCGCACAAGCTTGCCATGAAGCACAAATGT TGA
Translation (210 aa): MSAKSAISKEIFAPLDERMLGAVQVKRRTKKKIPFLATGGQGEYLTYICLSVTNKKPTQASITKVKQFEG STSFVRRSQWMLEQLRQVNGIDPNGDSAEFDLLFENAFDQWVASTASEKCTFFQILHHTCQRYLTDRKPE FINCQSKIMGGNSILHSAADSVTSAVQKASQALNERGERLGRAEEKTEDLKNSAQQFAETAHKLAMKHKC
|