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Report for CCDS2422.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2422.1 Public Homo sapiens 2 TTLL4 24 110 108 CCDS HistoryNCBI Gene:9654Re-query CCDS DB by CCDS ID:2422.1Re-query CCDS DB by GeneID:9654See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2422.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258398.8 ENSP00000258398.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000258398.8Link to Ensembl Protein Viewer:ENSP00000258398.4Re-query CCDS DB by Nucleotide ID:ENST00000258398Re-query CCDS DB by Protein ID:ENSP00000258398
Original member Current member EBI ENST00000392102.6 ENSP00000375951.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392102.6Link to Ensembl Protein Viewer:ENSP00000375951.1Re-query CCDS DB by Nucleotide ID:ENST00000392102Re-query CCDS DB by Protein ID:ENSP00000375951
Original member Current member NCBI NM_014640.5 NP_055455.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014640.5Link to Protein Sequence:NP_055455.3Re-query CCDS DB by Nucleotide ID:NM_014640Re-query CCDS DB by Protein ID:NP_055455Link to BLAST:NP_055455.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055455.3 1199 Q14679 1199 100% 0 0

Chromosomal Locations for CCDS 2422.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 218737677 218739163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218740058 218740167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218740521 218740584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218745109 218745233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218745691 218745801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218746155 218746231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218747003 218747194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218747290 218747372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218747597 218747725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218748105 218748227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218748836 218748934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218749253 218749387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218750009 218750146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218751704 218751806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218752763 218752973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218753115 218753185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218753584 218753669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 218754134 218754389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3600 nt):
ATGGCCTCAGCAGGAACACAGCACTATAGTATTGGCCTCCGCCAGAAAAACAGCTTCAAGCAGAGTGGTC
CCTCAGGCACAGTACCTGCCACGCCACCTGAGAAACCCTCGGAGGGCAGAGTCTGGCCTCAGGCCCATCA
GCAAGTGAAGCCAATCTGGAAGCTGGAAAAGAAGCAAGTGGAGACACTGTCAGCAGGGTTGGGCCCAGGC
CTCTTGGGCGTCCCACCCCAGCCAGCATATTTCTTTTGCCCCAGCACTTTATGTAGCTCTGGGACCACGG
CTGTCATTGCAGGCCACAGCAGTTCCTGTTACCTACACTCTCTCCCGGACTTGTTCAACAGCACCCTGCT
ATACCGCCGCTCCAGCTATAGGCAAAAACCGTACCAGCAACTGGAGTCTTTCTGCTTGCGTTCGAGCCCG
TCAGAAAAAAGCCCTTTTTCTCTCCCTCAAAAGAGCCTCCCTGTCAGTCTCACTGCCAACAAGGCCACTT
CTTCCATGGTCTTCTCCATGGCCCAGCCCATGGCCTCCTCATCCACAGAACCATACCTCTGCTTGGCAGC
GGCTGGGGAAAACCCTTCAGGGAAGAGCCTGGCCTCTGCCATCTCAGGGAAGATCCCATCTCCACTCTCT
TCCTCCTATAAGCCCATGCTGAATAATAATTCCTTCATGTGGCCAAATAGCACGCCAGTGCCTTTATTGC
AGACCACACAGGGCCTGAAGCCAGTATCGCCACCCAAGATCCAGCCTGTCTCCTGGCATCATTCAGGGGG
TACTGGAGACTGTGCACCGCAGCCTGTTGACCATAAGGTGCCCAAAAGCATTGGCACTGTCCCAGCTGAT
GCCAGTGCCCATATCGCCTTGTCTACCGCTAGCTCCCACGACACATCCACCACCAGTGTTGCCTCTTCCT
GGTATAACCGGAATAACTTAGCCATGAGGGCAGAGCCACTTTCCTGTGCTCTGGATGACAGCTCTGATTC
CCAGGATCCAACTAAGGAGATTCGGTTCACTGAGGCCGTGAGGAAATTGACCGCAAGAGGCTTTGAGAAG
ATGCCGAGGCAAGGCTGCCAGCTTGAACAGTCTAGTTTCCTGAACCCCAGCTTCCAGTGGAATGTCCTCA
ACAGGAGCAGGCGGTGGAAACCTCCTGCGGTAAATCAGCAGTTTCCTCAGGAGGATGCTGGATCGGTCAG
GCGGGTCCTCCCTGGTGCCTCAGATACCTTGGGGTTGGACAATACAGTCTTCTGTACCAAGCGTATCAGC
ATTCACCTCCTTGCCTCACATGCCAGTGGGCTCAATCACAACCCTGCCTGTGAATCTGTAATTGACTCCT
CAGCATTTGGAGAAGGCAAAGCTCCAGGTCCCCCTTTTCCTCAAACTCTTGGCATAGCCAACGTGGCCAC
CCGCCTCTCTTCCATCCAGCTGGGCCAGTCTGAGAAGGAGAGACCTGAGGAGGCCAGGGAGCTGGACTCA
TCTGATAGGGATATTAGTTCAGCTACTGACCTCCAGCCAGATCAGGCTGAGACTGAAGATACAGAAGAAG
AACTAGTAGATGGTTTGGAAGACTGTTGTAGCCGTGATGAGAATGAAGAGGAGGAGGGAGACTCAGAGTG
CTCCTCATTAAGTGCTGTCTCCCCCAGCGAATCGGTGGCCATGATCTCTAGAAGCTGTATGGAAATTCTG
ACCAAACCCCTTTCCAATCATGAGAAAGTTGTCCGACCAGCCCTCATCTACAGTCTCTTTCCCAACGTTC
CCCCTACCATCTATTTTGGCACTCGGGATGAGAGAGTGGAGAAACTTCCCTGGGAACAGAGGAAGTTGCT
CCGATGGAAGATGAGCACAGTGACCCCCAACATTGTCAAGCAGACCATTGGACGGTCCCACTTCAAAATC
AGCAAAAGAAACGATGACTGGCTGGGCTGCTGGGGTCACCACATGAAGTCTCCTAGTTTCCGATCCATTC
GAGAGCATCAGAAGCTAAACCATTTCCCAGGCTCATTCCAGATTGGGAGGAAGGACCGGCTATGGCGGAA
CCTGTCACGTATGCAGAGCCGCTTTGGCAAGAAGGAGTTCAGTTTCTTCCCCCAGTCCTTTATCCTGCCC
CAGGACGCCAAGCTCCTGCGCAAAGCGTGGGAGAGCAGCAGCCGCCAAAAGTGGATTGTGAAGCCACCAG
CATCAGCTCGAGGCATTGGCATCCAGGTTATTCACAAGTGGAGTCAGCTCCCCAAGCGAAGGCCCCTCCT
GGTACAGAGGTATCTACACAAACCCTACCTCATCAGCGGCAGCAAGTTTGACCTGCGGATCTATGTTTAT
GTCACTTCCTACGATCCTCTGCGGATTTACCTCTTTTCAGATGGACTGGTCCGCTTTGCCAGTTGCAAGT
ATTCGCCTTCCATGAAGAGCCTTGGCAATAAGTTCATGCACCTGACCAACTACAGTGTCAATAAAAAGAA
TGCCGAGTACCAGGCCAATGCAGATGAAATGGCTTGCCAGGGCCACAAATGGGCACTGAAGGCTTTGTGG
AACTACCTGAGCCAGAAGGGAGTCAATAGCGACGCCATCTGGGAGAAGATAAAGGATGTTGTTGTCAAAA
CTATCATCTCGTCAGAGCCCTATGTGACCAGCCTGCTCAAGATGTATGTGCGACGGCCCTATAGCTGCCA
TGAACTCTTTGGTTTTGACATCATGCTAGACGAAAACCTCAAGCCCTGGGTCCTGGAAGTCAACATTTCC
CCAAGCCTCCACTCCAGCTCTCCACTGGATATCAGCATCAAAGGCCAGATGATTCGTGACCTTCTGAATC
TGGCAGGTTTTGTCCTGCCCAATGCAGAGGATATCATTTCCAGCCCCAGCAGCTGCAGCAGCTCCACCAC
CAGCCTGCCCACCTCCCCTGGGGACAAATGTCGAATGGCTCCAGAGCATGTCACTGCACAGAAGATGAAG
AAAGCCTATTATCTGACCCAGAAAATTCCTGATCAGGACTTCTATGCATCTGTGCTGGATGTCCTGACAC
CAGATGATGTTCGGATTCTGGTTGAGATGGAAGATGAGTTTTCTCGCCGTGGTCAGTTTGAACGAATTTT
TCCTTCTCATATCTCCTCTCGCTATCTCCGCTTTTTTGAGCAGCCACGATATTTCAACATTCTCACCACC
CAATGGGAACAGAAATACCATGGCAACAAGCTTAAAGGAGTAGATCTGCTCCGGAGTTGGTGCTACAAAG
GGTTCCACATGGGAGTTGTCTCTGATTCTGCTCCAGTGTGGTCTCTCCCGACATCACTTCTGACTATCTC
AAAGGATGACGTGATACTCAATGCCTTCAGCAAATCAGAGACTAGCAAGCTGGGAAAACAAAGCTCCTGT
GAGGTTAGCCTACTACTCTCTGAAGACGGGACCACGCCCAAATCCAAGAAGACTCAAGCTGGCCTTTCCC
CTTATCCCCAGAAACCCAGTTCCTCAAAGGACAGTGAGGACACCAGCAAAGAGCCCAGCCTTTCTACCCA
GACGTTACCTGTGATCAAGTGCTCTGGGCAGACTTCAAGACTTTCTGCTTCCTCCACTTTCCAGTCAATC
AGTGACTCCCTCCTGGCTGTGAGCCCATAA

Translation (1199 aa):
MASAGTQHYSIGLRQKNSFKQSGPSGTVPATPPEKPSEGRVWPQAHQQVKPIWKLEKKQVETLSAGLGPG
LLGVPPQPAYFFCPSTLCSSGTTAVIAGHSSSCYLHSLPDLFNSTLLYRRSSYRQKPYQQLESFCLRSSP
SEKSPFSLPQKSLPVSLTANKATSSMVFSMAQPMASSSTEPYLCLAAAGENPSGKSLASAISGKIPSPLS
SSYKPMLNNNSFMWPNSTPVPLLQTTQGLKPVSPPKIQPVSWHHSGGTGDCAPQPVDHKVPKSIGTVPAD
ASAHIALSTASSHDTSTTSVASSWYNRNNLAMRAEPLSCALDDSSDSQDPTKEIRFTEAVRKLTARGFEK
MPRQGCQLEQSSFLNPSFQWNVLNRSRRWKPPAVNQQFPQEDAGSVRRVLPGASDTLGLDNTVFCTKRIS
IHLLASHASGLNHNPACESVIDSSAFGEGKAPGPPFPQTLGIANVATRLSSIQLGQSEKERPEEARELDS
SDRDISSATDLQPDQAETEDTEEELVDGLEDCCSRDENEEEEGDSECSSLSAVSPSESVAMISRSCMEIL
TKPLSNHEKVVRPALIYSLFPNVPPTIYFGTRDERVEKLPWEQRKLLRWKMSTVTPNIVKQTIGRSHFKI
SKRNDDWLGCWGHHMKSPSFRSIREHQKLNHFPGSFQIGRKDRLWRNLSRMQSRFGKKEFSFFPQSFILP
QDAKLLRKAWESSSRQKWIVKPPASARGIGIQVIHKWSQLPKRRPLLVQRYLHKPYLISGSKFDLRIYVY
VTSYDPLRIYLFSDGLVRFASCKYSPSMKSLGNKFMHLTNYSVNKKNAEYQANADEMACQGHKWALKALW
NYLSQKGVNSDAIWEKIKDVVVKTIISSEPYVTSLLKMYVRRPYSCHELFGFDIMLDENLKPWVLEVNIS
PSLHSSSPLDISIKGQMIRDLLNLAGFVLPNAEDIISSPSSCSSSTTSLPTSPGDKCRMAPEHVTAQKMK
KAYYLTQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPSHISSRYLRFFEQPRYFNILTT
QWEQKYHGNKLKGVDLLRSWCYKGFHMGVVSDSAPVWSLPTSLLTISKDDVILNAFSKSETSKLGKQSSC
EVSLLLSEDGTTPKSKKTQAGLSPYPQKPSSSKDSEDTSKEPSLSTQTLPVIKCSGQTSRLSASSTFQSI
SDSLLAVSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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