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Report for CCDS9485.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9485.1 Public Homo sapiens 13 RAP2A 24 110 108 CCDS HistoryNCBI Gene:5911Re-query CCDS DB by CCDS ID:9485.1Re-query CCDS DB by GeneID:5911See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9485.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000245304.5 ENSP00000245304.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000245304.5Link to Ensembl Protein Viewer:ENSP00000245304.3Re-query CCDS DB by Nucleotide ID:ENST00000245304Re-query CCDS DB by Protein ID:ENSP00000245304
Original member Current member NCBI NM_021033.7 NP_066361.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021033.7Link to Protein Sequence:NP_066361.1Re-query CCDS DB by Nucleotide ID:NM_021033Re-query CCDS DB by Protein ID:NP_066361Link to BLAST:NP_066361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066361.1 183 P10114 183 100% 0 0

Chromosomal Locations for CCDS 9485.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 97434471 97434784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 97464205 97464442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGCGCGAGTACAAAGTGGTGGTGCTGGGCTCGGGCGGGGTAGGCAAATCCGCCCTGACCGTGCAGTTCG
TGACCGGCACCTTCATCGAGAAATACGACCCCACCATCGAGGACTTCTACCGCAAGGAGATCGAGGTGGA
TTCGTCGCCGTCGGTGCTGGAGATCCTGGACACGGCGGGCACCGAGCAGTTCGCGTCCATGCGGGACCTG
TACATCAAGAACGGCCAGGGCTTCATCCTCGTCTACAGCCTCGTCAACCAGCAGAGCTTCCAGGACATCA
AGCCCATGCGGGACCAGATCATCCGCGTGAAGCGGTATGAGAAAGTGCCAGTCATCTTGGTTGGGAACAA
AGTGGACCTGGAAAGTGAGAGAGAAGTATCGTCCAGCGAAGGCAGAGCCCTTGCTGAAGAGTGGGGCTGC
CCCTTTATGGAAACTTCCGCTAAGAGTAAAACAATGGTGGACGAACTCTTTGCAGAAATTGTGAGGCAGA
TGAACTATGCTGCTCAGCCTGACAAAGATGACCCATGCTGTTCTGCATGTAACATACAATAG

Translation (183 aa):
MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDL
YIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGC
PFMETSAKSKTMVDELFAEIVRQMNYAAQPDKDDPCCSACNIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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