NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10226.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10226.3 Public Homo sapiens 15 CALML4 24 110 108 CCDS HistoryNCBI Gene:91860Re-query CCDS DB by CCDS ID:10226.3Re-query CCDS DB by GeneID:91860See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10226.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000467889.3 ENSP00000419081.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000467889.3Link to Ensembl Protein Viewer:ENSP00000419081.2Re-query CCDS DB by Nucleotide ID:ENST00000467889Re-query CCDS DB by Protein ID:ENSP00000419081
Original member Current member NCBI NM_033429.3 NP_219501.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033429.3Link to Protein Sequence:NP_219501.3Re-query CCDS DB by Nucleotide ID:NM_033429Re-query CCDS DB by Protein ID:NP_219501Link to BLAST:NP_219501.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_219501.3 153 Q96GE6-6 153 100% 0 0

Chromosomal Locations for CCDS 10226.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 68194015 68194112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68197440 68197628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68199541 68199681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68205121 68205151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68205245 68205247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (462 nt):
ATGGCCAAGTTTCTTTCCCAAGACCAAATTAATGAGTACAAGGAATGCTTCTCCCTGTATGACAAGCAGC
AGAGGGGGAAGATAAAAGCCACCGACCTCATGGTGGCCATGAGGTGCCTGGGGGCCAGCCCGACGCCAGG
GGAGGTGCAGCGGCACCTGCAGACCCACGGGATAGACGGAAATGGAGAGCTGGATTTCTCCACTTTTCTG
ACCATTATGCACATGCAAATAAAACAAGAAGACCCAAAGAAAGAAATTCTTCTAGCCATGTTGATGGTGG
ACAAGGAGAAGAAAGGTTACGTCATGGCGTCCGACCTGCGGTCAAAACTCACGAGTCTGGGGGAGAAGCT
CACCCACAAGGAAGTGGATGATCTCTTCAGGGAAGCAGATATCGAACCCAATGGCAAAGTGAAGTATGAT
GAATTTATCCACAAGATCACCCTTCCTGGACGGGACTATTGA

Translation (153 aa):
MAKFLSQDQINEYKECFSLYDKQQRGKIKATDLMVAMRCLGASPTPGEVQRHLQTHGIDGNGELDFSTFL
TIMHMQIKQEDPKKEILLAMLMVDKEKKGYVMASDLRSKLTSLGEKLTHKEVDDLFREADIEPNGKVKYD
EFIHKITLPGRDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH