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Report for CCDS3237.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3237.1 Public Homo sapiens 3 TTC14 24 110 108 CCDS HistoryNCBI Gene:151613Re-query CCDS DB by CCDS ID:3237.1Re-query CCDS DB by GeneID:151613See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3237.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296015.9 ENSP00000296015.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296015.9Link to Ensembl Protein Viewer:ENSP00000296015.4Re-query CCDS DB by Nucleotide ID:ENST00000296015Re-query CCDS DB by Protein ID:ENSP00000296015
Original member Current member NCBI NM_133462.4 NP_597719.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133462.4Link to Protein Sequence:NP_597719.1Re-query CCDS DB by Nucleotide ID:NM_133462Re-query CCDS DB by Protein ID:NP_597719Link to BLAST:NP_597719.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_597719.1 770 Q96N46-1 770 100% 0 0

Chromosomal Locations for CCDS 3237.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 180602262 180602422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180602891 180603015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180603124 180603323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180604225 180604309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180604478 180604607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180604852 180605007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180605766 180605837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180606253 180606372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180606481 180606603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180607648 180607765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180608701 180608810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 180609630 180610542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2313 nt):
ATGGACCGGGACCTTTTGCGGCAGTCGCTAAATTGCCACGGGTCGTCTTTGCTCTCTCTACTTCGGAGCG
AACAGCAGGACAATCCACACTTCCGTAGCCTCCTGGGGTCGGCCGCCGAGCCAGCCCGGGGCCCGCCGCC
CCAGCACCCGTTGCAGGGCAGAAAAGAGAAGAGAGTTGACAACATCGAGATACAGAAATTCATCTCCAAA
AAAGCGGATCTGCTTTTTGCACTTTCCTGGAAATCAGATGCACCTGCAACTTCTGAAATTAATGAAGACA
GTGAAGATCATTATGCAATCATGCCACCTTTAGAGCAATTCATGGAGATACCTAGTATGGATCGGAGAGA
GCTGTTTTTCCGAGATATTGAGCGTGGTGATATAGTGATTGGAAGAATTAGTTCTATTCGGGAATTCGGT
TTTTTCATGGTGTTGATCTGTTTAGGAAGTGGTATCATGAGAGATATAGCCCACTTAGAAATCACAGCTC
TTTGTCCCTTAAGAGATGTGCCTTCTCACAGTAACCATGGGGATCCTTTATCATATTACCAAACTGGTGA
CATCATTCGAGCTGGAATCAAGGATATTGACAGATACCATGAAAAGCTAGCAGTATCTCTGTATAGCTCT
TCTCTTCCACCACACCTATCTGGTATTAAATTAGGTGTAATTAGCTCTGAAGAGCTTCCTTTATACTACA
GGAGAAGTGTTGAGCTAAATAGCAATTCTTTGGAGTCCTATGAAAATGTCATGCAGAGTTCCTTGGGATT
TGTTAATCCAGGAGTAGTTGAATTCCTTCTAGAAAAACTAGGAATAGATGAATCTAATCCACCATCTTTA
ATGAGAGGCCTACAAAGCAAAAATTTCTCTGAAGATGATTTTGCTTCTGCATTGAGAAAAAAACAATCCG
CATCTTGGGCTTTAAAATGTGTGAAGATCGGAGTTGACTATTTTAAAGTTGGACGCCATGTGGATGCTAT
GAATGAATACAATAAAGCTTTGGAAATAGACAAACAAAACGTGGAAGCTTTGGTAGCTCGTGGAGCATTA
TATGCGACAAAAGGAAGTTTGAACAAAGCAATAGAAGATTTTGAGCTTGCATTAGAAAACTGTCCAACTC
ACAGAAATGCAAGAAAATACCTCTGCCAGACACTTGTAGAGAGAGGAGGACAGTTAGAAGAAGAAGAAAA
GTTTTTAAATGCTGAAAGTTACTATAAGAAAGCTTTGGCTTTGGATGAGACTTTTAAAGATGCAGAGGAT
GCTTTGCAGAAACTTCATAAATATATGCAGAAATCTTTGGAATTAAGAGAAAAACAAGCTGAAAAGGAAG
AAAAGCAGAAAACAAAGAAAATAGAAACAAGTGCAGAAAAGTTGCGTAAGCTCTTAAAAGAAGAGAAGAG
GCTAAAGAAGAAAAGAAGAAAATCAACTTCTTCTTCAAGTGTTTCTTCTGCTGATGAATCAGTGTCTTCA
TCATCATCCTCTTCCTCTTCTGGTCACAAAAGGCATAAGAAACATAAGAGGAACCGTTCAGAGTCTTCTC
GCAGTTCCAGAAGGCATTCATCTAGGGCATCCTCAAATCAGATAGATCAGAATAGGAAAGATGAGTGCTA
CCCAGTTCCAGCTAATACTTCAGCATCTTTTCTTAACCATAAACAAGAAGTGGAGAAACTACTGGGGAAG
CAGGATAGGTTACAGTATGAAAAGACACAGATAAAAGAGAAAGATAGATGCCCTCTCTCTTCATCTTCAC
TTGAAATACCGGATGATTTTGGAGGTAGGTCTGAAGATCCAAGAGATTTTTATAACAGCTATAAAACCCA
AGCAGGTAGTAGCAAAACAGAAAAGCCATATAAATCAGAAAGACATTTTTCCAGTAGAAGAAATTCCTCA
GATTCCTTCTGTAGGAATTCAGAGGACAAGATTTATGGTTATAGGAGATTTGAAAAGGATATAGAGGGAA
GAAAAGAGCACTATAGAAGGTGGGAACCAGGTTCTGTGAGGCATTCTACCTCACCAGCAAGCTCAGAATA
CTCTTGGAAGTCAGTTGAGAAATACAAAAAATACGCTCACTCTGGATCACGTGATTTCAGTAGACATGAG
CAAAGATACCGTTTAAATACAAATCAAGGAGAATATGAAAGAGAGGACAATTATGGGGAGGATATCAAAA
CAGAGGTTCCAGAAGAAGATGCACTAAGTAGCAAAGAACACTCAGAAAGCAGTGTTAAGAAAAATTTACC
TCAGAATTTACTGAATATATTTAATCAGATAGCTGAATTTGAAAAAGAAAAAGGAAATAAGTCAAAAAAT
TAA

Translation (770 aa):
MDRDLLRQSLNCHGSSLLSLLRSEQQDNPHFRSLLGSAAEPARGPPPQHPLQGRKEKRVDNIEIQKFISK
KADLLFALSWKSDAPATSEINEDSEDHYAIMPPLEQFMEIPSMDRRELFFRDIERGDIVIGRISSIREFG
FFMVLICLGSGIMRDIAHLEITALCPLRDVPSHSNHGDPLSYYQTGDIIRAGIKDIDRYHEKLAVSLYSS
SLPPHLSGIKLGVISSEELPLYYRRSVELNSNSLESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPPSL
MRGLQSKNFSEDDFASALRKKQSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVARGAL
YATKGSLNKAIEDFELALENCPTHRNARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALDETFKDAED
ALQKLHKYMQKSLELREKQAEKEEKQKTKKIETSAEKLRKLLKEEKRLKKKRRKSTSSSSVSSADESVSS
SSSSSSSGHKRHKKHKRNRSESSRSSRRHSSRASSNQIDQNRKDECYPVPANTSASFLNHKQEVEKLLGK
QDRLQYEKTQIKEKDRCPLSSSSLEIPDDFGGRSEDPRDFYNSYKTQAGSSKTEKPYKSERHFSSRRNSS
DSFCRNSEDKIYGYRRFEKDIEGRKEHYRRWEPGSVRHSTSPASSEYSWKSVEKYKKYAHSGSRDFSRHE
QRYRLNTNQGEYEREDNYGEDIKTEVPEEDALSSKEHSESSVKKNLPQNLLNIFNQIAEFEKEKGNKSKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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