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Report for CCDS6993.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6993.1 Public Homo sapiens 9 NACC2 24 110 108 CCDS HistoryNCBI Gene:138151Re-query CCDS DB by CCDS ID:6993.1Re-query CCDS DB by GeneID:138151See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6993.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000277554.4 ENSP00000277554.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000277554.4Link to Ensembl Protein Viewer:ENSP00000277554.2Re-query CCDS DB by Nucleotide ID:ENST00000277554Re-query CCDS DB by Protein ID:ENSP00000277554
Original member Current member EBI ENST00000371753.5 ENSP00000360818.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371753.5Link to Ensembl Protein Viewer:ENSP00000360818.1Re-query CCDS DB by Nucleotide ID:ENST00000371753Re-query CCDS DB by Protein ID:ENSP00000360818
Original member Current member NCBI NM_144653.5 NP_653254.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144653.5Link to Protein Sequence:NP_653254.1Re-query CCDS DB by Nucleotide ID:NM_144653Re-query CCDS DB by Protein ID:NP_653254Link to BLAST:NP_653254.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653254.1 587 Q96BF6 587 100% 0 0

Chromosomal Locations for CCDS 6993.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 136011516 136012024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136013199 136013296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136013864 136013969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136016265 136016429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136049636 136050521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1764 nt):
ATGTCTCAGATGCTGCACATCGAGATCCCCAACTTCGGGAACACAGTGCTGGGCTGCCTGAACGAGCAGC
GCCTGCTGGGCCTCTACTGCGATGTGTCCATCGTGGTCAAGGGCCAGGCCTTCAAGGCCCACCGGGCGGT
GCTGGCCGCCAGCAGCCTCTACTTCCGCGACCTGTTCAGCGGCAACAGCAAGAGCGCCTTCGAGCTGCCC
GGCTCCGTGCCGCCCGCCTGCTTCCAGCAGATCCTGTCCTTCTGCTACACGGGCAGGCTCACCATGACGG
CCAGCGAGCAGCTCGTGGTCATGTACACGGCCGGCTTCCTGCAGATCCAGCACATCGTGGAGCGCGGCAC
CGACCTCATGTTCAAGGTGAGCTCGCCCCACTGCGACTCGCAGACCGCTGTGATCGAGGACGCCGGCTCC
GAGCCCCAGAGCCCCTGCAACCAGCTGCAGCCGGCCGCCGCCGCCGCGGCCCCCTACGTCGTGTCCCCCT
CGGTGCCCATCCCGCTGCTGACCCGAGTAAAGCATGAAGCCATGGAGCTGCCGCCGGCCGGCCCAGGCCT
GGCCCCCAAGCGCCCGCTGGAGACGGGGCCCCGGGACGGCGTGGCGGTGGCCGCGGGGGCTGCGGTGGCG
GCGGGCACAGCCCCTCTCAAACTGCCCCGTGTCTCCTACTACGGGGTGCCCAGCCTGGCCACCCTCATCC
CCGGCATCCAGCAGATGCCCTACCCCCAGGGGGAGCGGACCAGTCCAGGCGCCAGCAGCCTGCCCACCAC
CGACAGCCCCACCTCGTACCACAACGAGGAGGACGAGGAGGACGACGAGGCCTACGACACCATGGTGGAG
GAGCAGTACGGCCAGATGTACATCAAGGCCTCCGGCAGCTATGCAGTGCAAGAGAAGCCTGAGCCAGTGC
CGCTGGAGAGCCGCTCCTGCGTCCTCATCCGCCGCGACCTCGTGGCCCTACCTGCCAGCCTCATCAGCCA
GATCGGATACCGCTGCCATCCCAAGCTCTACTCGGAAGGGGACCCCGGGGAGAAGCTGGAGCTGGTGGCA
GGCTCTGGGGTCTACATCACACGCGGCCAGCTGATGAACTGCCACCTGTGTGCAGGGGTGAAGCATAAGG
TCTTGCTGCGGAGGCTCCTGGCCACCTTCTTTGACAGGAACACGCTGGCCAACAGCTGCGGGACTGGCAT
CCGCTCGTCCACCAGCGACCCCAGCCGGAAGCCGCTGGACAGCCGGGTCCTGAACGCTGTGAAATTGTAC
TGTCAGAACTTCGCCCCCAGCTTCAAGGAGAGCGAGATGAACGTGATCGCCGCGGACATGTGCACCAACG
CCCGCCGCGTTCGCAAGCGCTGGCTGCCCAAGATCAAGTCCATGCTGCCGGAGGGCGTGGAGATGTACCG
CACGGTCATGGGCTCCGCCGCCGCCAGCGTGCCCCTCGACCCCGAGTTCCCGCCTGCCGCGGCACAGGTG
TTCGAGCAACGCATCTACGCCGAGCGGCGGGGCGACGCCGCCACCATCGTGGCTCTGAGAACTGACGCCG
TGAATGTTGACCTGAGTGCCGCCGCCAACCCCGCCTTCGACGCCGGCGAGGAGGTGGACGGGGCTGGCTC
GGTCATCCAGGAGGTGGCCGCCCCCGAGCCGCTGCCCGCCGATGGCCAGAGCCCCCCACAGCCCTTTGAG
CAGGGCGGGGGCGGCCCCAGCAGGCCCCAGACGCCGGCGGCCGCGGCCCGGAGGCCGGAGGGCACCTATG
CAGGGACCTTGTAA

Translation (587 aa):
MSQMLHIEIPNFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSGNSKSAFELP
GSVPPACFQQILSFCYTGRLTMTASEQLVVMYTAGFLQIQHIVERGTDLMFKVSSPHCDSQTAVIEDAGS
EPQSPCNQLQPAAAAAAPYVVSPSVPIPLLTRVKHEAMELPPAGPGLAPKRPLETGPRDGVAVAAGAAVA
AGTAPLKLPRVSYYGVPSLATLIPGIQQMPYPQGERTSPGASSLPTTDSPTSYHNEEDEEDDEAYDTMVE
EQYGQMYIKASGSYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRCHPKLYSEGDPGEKLELVA
GSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFDRNTLANSCGTGIRSSTSDPSRKPLDSRVLNAVKLY
CQNFAPSFKESEMNVIAADMCTNARRVRKRWLPKIKSMLPEGVEMYRTVMGSAAASVPLDPEFPPAAAQV
FEQRIYAERRGDAATIVALRTDAVNVDLSAAANPAFDAGEEVDGAGSVIQEVAAPEPLPADGQSPPQPFE
QGGGGPSRPQTPAAAARRPEGTYAGTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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