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Report for CCDS11246.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11246.2 Public Homo sapiens 17 DHRS13 24 110 108 CCDS HistoryNCBI Gene:147015Re-query CCDS DB by CCDS ID:11246.2Re-query CCDS DB by GeneID:147015See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11246.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378895.9 ENSP00000368173.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378895.9Link to Ensembl Protein Viewer:ENSP00000368173.4Re-query CCDS DB by Nucleotide ID:ENST00000378895Re-query CCDS DB by Protein ID:ENSP00000368173
Original member Current member NCBI NM_144683.4 NP_653284.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144683.4Link to Protein Sequence:NP_653284.2Re-query CCDS DB by Nucleotide ID:NM_144683Re-query CCDS DB by Protein ID:NP_653284Link to BLAST:NP_653284.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653284.2 377 Q6UX07-1 377 100% 0 0

Chromosomal Locations for CCDS 11246.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 28898441 28898892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28900990 28901301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28901493 28901616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28902583 28902701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28902818 28902944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGGAGGCGCTGCTGCTGGGCGCGGGGTTGCTGCTGGGCGCTTACGTGCTTGTCTACTACAACCTGGTGA
AGGCCCCGCCGTGCGGCGGCATGGGCAACCTGCGGGGCCGCACGGCCGTGGTCACGGGCGCCAACAGCGG
CATCGGAAAGATGACGGCGCTGGAGCTGGCGCGCCGGGGAGCGCGCGTGGTGCTGGCCTGCCGCAGCCAG
GAGCGCGGGGAGGCGGCTGCCTTCGACCTCCGCCAGGAGAGTGGGAACAATGAGGTCATCTTCATGGCCT
TGGACTTGGCCAGTCTGGCCTCGGTGCGGGCCTTTGCCACTGCCTTTCTGAGCTCTGAGCCACGGTTGGA
CATCCTCATCCACAATGCCGGTATCAGTTCCTGTGGCCGGACCCGTGAGGCGTTTAACCTGCTGCTTCGG
GTGAACCATATCGGTCCCTTTCTGCTGACACATCTGCTGCTGCCTTGCCTGAAGGCATGTGCCCCTAGCC
GCGTGGTGGTGGTAGCCTCAGCTGCCCACTGTCGGGGACGTCTTGACTTCAAACGCCTGGACCGCCCAGT
GGTGGGCTGGCGGCAGGAGCTGCGGGCATATGCTGACACTAAGCTGGCTAATGTACTGTTTGCCCGGGAG
CTCGCCAACCAGCTTGAGGCCACTGGCGTCACCTGCTATGCAGCCCACCCAGGGCCTGTGAACTCGGAGC
TGTTCCTGCGCCATGTTCCTGGATGGCTGCGCCCACTTTTGCGCCCATTGGCTTGGCTGGTGCTCCGGGC
ACCAAGAGGGGGTGCCCAGACACCCCTGTATTGTGCTCTACAAGAGGGCATCGAGCCCCTCAGTGGGAGA
TATTTTGCCAACTGCCATGTGGAAGAGGTGCCTCCAGCTGCCCGAGACGACCGGGCAGCCCATCGGCTAT
GGGAGGCCAGCAAGAGGCTGGCAGGGCTTGGGCCTGGGGAGGATGCTGAACCCGATGAAGACCCCCAGTC
TGAGGACTCAGAGGCCCCATCTTCTCTAAGCACCCCCCACCCTGAGGAGCCCACAGTTTCTCAACCTTAC
CCCAGCCCTCAGAGCTCACCAGATTTGTCTAAGATGACGCACCGAATTCAGGCTAAAGTTGAGCCTGAGA
TCCAGCTCTCCTAA

Translation (377 aa):
MEALLLGAGLLLGAYVLVYYNLVKAPPCGGMGNLRGRTAVVTGANSGIGKMTALELARRGARVVLACRSQ
ERGEAAAFDLRQESGNNEVIFMALDLASLASVRAFATAFLSSEPRLDILIHNAGISSCGRTREAFNLLLR
VNHIGPFLLTHLLLPCLKACAPSRVVVVASAAHCRGRLDFKRLDRPVVGWRQELRAYADTKLANVLFARE
LANQLEATGVTCYAAHPGPVNSELFLRHVPGWLRPLLRPLAWLVLRAPRGGAQTPLYCALQEGIEPLSGR
YFANCHVEEVPPAARDDRAAHRLWEASKRLAGLGPGEDAEPDEDPQSEDSEAPSSLSTPHPEEPTVSQPY
PSPQSSPDLSKMTHRIQAKVEPEIQLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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