NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8334.1 Public Homo sapiens 11 KBTBD3 24 110 108 CCDS HistoryNCBI Gene:143879Re-query CCDS DB by CCDS ID:8334.1Re-query CCDS DB by GeneID:143879See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531837.2 ENSP00000432163.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000531837.2Link to Ensembl Protein Viewer:ENSP00000432163.1Re-query CCDS DB by Nucleotide ID:ENST00000531837Re-query CCDS DB by Protein ID:ENSP00000432163
Original member Current member EBI ENST00000526793.5 ENSP00000436262.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526793.5Link to Ensembl Protein Viewer:ENSP00000436262.1Re-query CCDS DB by Nucleotide ID:ENST00000526793Re-query CCDS DB by Protein ID:ENSP00000436262
Original member Current member NCBI NM_152433.4 NP_689646.2 Accepted alive Link to Nucleotide Sequence:NM_152433.4Link to Protein Sequence:NP_689646.2Re-query CCDS DB by Nucleotide ID:NM_152433Re-query CCDS DB by Protein ID:NP_689646Link to BLAST:NP_689646.2
Original member Current member NCBI NM_198439.3 NP_940841.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198439.3Link to Protein Sequence:NP_940841.1Re-query CCDS DB by Nucleotide ID:NM_198439Re-query CCDS DB by Protein ID:NP_940841Link to BLAST:NP_940841.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689646.2 612 Q8NAB2 612 100% 0 0
NP_940841.1 612 Q8NAB2 612 100% 0 0

Chromosomal Locations for CCDS 8334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 106052850 106054455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 106058865 106059097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1839 nt):
ATGGAATTGGCTATGGATAATTCATATGCTTTCAATCAACGAAGCACATGTAATGGAATTCCATCTGAGA
AGAAAAACAACTTCCTTGTATCAGAAGATCATGGACAAAAAATCTTAAGTGTACTACAGAATTTTAGAGA
ACAAAATGTCTTTTATGATTTCAAAATAATTATGAAAGATGAAATAATCCCGTGTCATCGTTGTGTGTTA
GCAGCATGCAGTGACTTTTTCAGGGCTATGTTTGAAGTAAACATGAAAGAAAGAGATGATGGAAGTGTTA
CCATTACTAATTTGTCCTCCAAGGCAGTAAAAGCATTTCTCGATTATGCCTATACTGGAAAAACAAAAAT
AACAGATGATAATGTGGAAATGTTCTTCCAGTTGTCATCATTTCTTCAAGTTTCCTTCCTATCCAAAGCT
TGCAGTGACTTTTTAATAAAAAGTATTAATCTTGTCAATTGTTTACAGTTATTATCTATATCAGATAGCT
ATGGCTCCACCAGTTTGTTTGATCATGCATTACACTTTGTACAACATCACTTTTCTTTATTATTTAAATC
CAGTGATTTCTTAGAGATGAATTTTGGAGTACTACAGAAATGTCTGGAATCAGATGAATTAAATGTTCCT
GAAGAAGAAATGGTACTGAAAGTTGTCCTTAGTTGGACTAAACATAACTTAGAATCAAGGCAAAAGTATC
TGCCTCATTTGATTGAAAAAGTGAGATTACATCAGTTATCTGAGGAGACACTTCAGGACTGTCTGTTCAA
TGAAGAGAGTTTACTCAAAAGCACAAACTGTTTTGACATAATCATGGATGCAATTAAGTGTGTGCAAGGT
TCTGGTGGACTCTTCCCTGATGCTCGACCATCCACAACTGAGAAATACATATTCATTCACAAAACTGAGG
AAAATGGAGAAAATCAATATACATTTTGCTATAACATTAAATCTGATTCATGGAAAATACTGCCGCAATC
ACACCTGATTGATTTGCCAGGATCTAGTCTTTCGAGTTACGGAGAGAAAATATTCTTGACAGGTGGTTGC
AAAGGGAAATGTTGTCGAACGGTTCGACTGCATATTGCCGAGTCATATCATGATGCCACTGATCAAACCT
GGTGCTACTGTCCAGTGAAAAATGATTTCTTCTTGGTATCAACTATGAAAACACCAAGAACCATGCATAC
ATCAGTTATGGCTCTCGATAGATTATTTGTCATAGGTGGAAAAACTAGAGGATCCCGGGACATTAAAAGT
CTCTTAGATGTTGAATCTTACAATCCTCTTTCCAAAGAATGGATATCTGTTAGCCCATTACCCAGAGGCA
TATACTATCCAGAAGCAAGCACATGCCAAAATGTAATTTATGTTCTTGGATCAGAGGTAGAGATTACAGA
TGCTTTTAACCCATCACTTGATTGCTTTTTTAAATACAATGCTACAACTGATCAGTGGTCTGAACTAGTA
GCAGAGTTTGGGCAATTTTTTCATGCAACATTAATTAAAGCTGTACCAGTAAACTGTACACTGTATATAT
GTGACCTTTCCACCTATAAGGTTTATAGTTTTTGTCCAGACACTTGTGTTTGGAAAGGCGAAGGATCTTT
TGAGTGTGCAGGCTTTAATGCAGGTGCAATTGGAATTGAAGATAAAATTTATATATTAGGTGGTGATTAT
GCACCAGATGAAATCACAGATGAAGTGCAGGTCTACCACAGCAACAGGTCTGAATGGGAAGAAGTTTCAC
CAATGCCTAGAGCCTTAACAGAATTTTACTGCCAGGTGATTCAGTTTAATAAATACAGAGACCCATGGTT
TTCTAATCTATGTGCTTGA

Translation (612 aa):
MELAMDNSYAFNQRSTCNGIPSEKKNNFLVSEDHGQKILSVLQNFREQNVFYDFKIIMKDEIIPCHRCVL
AACSDFFRAMFEVNMKERDDGSVTITNLSSKAVKAFLDYAYTGKTKITDDNVEMFFQLSSFLQVSFLSKA
CSDFLIKSINLVNCLQLLSISDSYGSTSLFDHALHFVQHHFSLLFKSSDFLEMNFGVLQKCLESDELNVP
EEEMVLKVVLSWTKHNLESRQKYLPHLIEKVRLHQLSEETLQDCLFNEESLLKSTNCFDIIMDAIKCVQG
SGGLFPDARPSTTEKYIFIHKTEENGENQYTFCYNIKSDSWKILPQSHLIDLPGSSLSSYGEKIFLTGGC
KGKCCRTVRLHIAESYHDATDQTWCYCPVKNDFFLVSTMKTPRTMHTSVMALDRLFVIGGKTRGSRDIKS
LLDVESYNPLSKEWISVSPLPRGIYYPEASTCQNVIYVLGSEVEITDAFNPSLDCFFKYNATTDQWSELV
AEFGQFFHATLIKAVPVNCTLYICDLSTYKVYSFCPDTCVWKGEGSFECAGFNAGAIGIEDKIYILGGDY
APDEITDEVQVYHSNRSEWEEVSPMPRALTEFYCQVIQFNKYRDPWFSNLCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH