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Report for CCDS12191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12191.1 Public Homo sapiens 19 CTXN1 24 110 108 CCDS HistoryNCBI Gene:404217Re-query CCDS DB by CCDS ID:12191.1Re-query CCDS DB by GeneID:404217See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12191.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318978.6 ENSP00000313226.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318978.6Link to Ensembl Protein Viewer:ENSP00000313226.3Re-query CCDS DB by Nucleotide ID:ENST00000318978Re-query CCDS DB by Protein ID:ENSP00000313226
Original member Current member NCBI NM_206833.4 NP_996664.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206833.4Link to Protein Sequence:NP_996664.1Re-query CCDS DB by Nucleotide ID:NM_206833Re-query CCDS DB by Protein ID:NP_996664Link to BLAST:NP_996664.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996664.1 82 P60606 82 100% 0 0

Chromosomal Locations for CCDS 12191.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 7925290 7925538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (249 nt):
ATGAGCGCGACGTGGACGCTGTCGCCGGAGCCCCTGCCGCCGTCGACGGGGCCCCCGGTGGGCGCGGGCC
TGGACGCGGAGCAGCGCACGGTGTTCGCCTTCGTGCTCTGCCTGCTCGTGGTGCTGGTGCTGTTGATGGT
GCGCTGCGTGCGCATCCTGCTCGACCCCTACAGCCGCATGCCCGCCTCGTCCTGGACCGACCACAAGGAG
GCGCTCGAGCGCGGGCAGTTCGACTACGCGTTGGTGTGA

Translation (82 aa):
MSATWTLSPEPLPPSTGPPVGAGLDAEQRTVFAFVLCLLVVLVLLMVRCVRILLDPYSRMPASSWTDHKE
ALERGQFDYALV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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