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Report for CCDS35212.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35212.2 Public Homo sapiens X MAP3K15 24 110 108 CCDS HistoryNCBI Gene:389840Re-query CCDS DB by CCDS ID:35212.2Re-query CCDS DB by GeneID:389840See the combined annotation on chromosome X in Sequence Viewer

Public Note for CCDS 35212.1
This gene lacks full-length transcript support, and therefore this CCDS representation has an inferred exon combination based on partial transcript and RNA-seq alignments.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 35212.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338883.9 ENSP00000345629.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338883.9Link to Ensembl Protein Viewer:ENSP00000345629.4Re-query CCDS DB by Nucleotide ID:ENST00000338883Re-query CCDS DB by Protein ID:ENSP00000345629
Original member Current member NCBI NM_001001671.4 NP_001001671.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001671.4Link to Protein Sequence:NP_001001671.3Re-query CCDS DB by Nucleotide ID:NM_001001671Re-query CCDS DB by Protein ID:NP_001001671Link to BLAST:NP_001001671.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001671.3 1313 Q6ZN16-1 1313 100% 0 0

Chromosomal Locations for CCDS 35212.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 19360749 19360833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19361339 19361415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19361493 19361593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19362738 19362850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19369054 19369219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19370959 19371064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19371345 19371530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19372653 19372827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19373536 19373695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19374477 19374660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19380120 19380277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19392002 19392107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19392343 19392473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19395081 19395208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19398226 19398359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19400576 19400663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19407188 19407283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19409924 19409973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19413357 19413464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19415107 19415257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19425531 19425690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19426231 19426343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19431438 19431608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19456913 19457019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19459985 19460153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19464213 19464406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19486482 19486505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19488828 19488967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 19514901 19515261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3942 nt):
ATGGAGAGCGGCGGTGGGAATGCTCCGGCCGGGGCCCTCGGGGCGGCGAGCGAGTCCCCTCAGTGCCCGC
CGCCGCCGGGGGTGGAGGGCGCGGCCGGGCCGGCGGAGCCCGACGGGGCGGCGGAGGGCGCGGCAGGCGG
CAGCGGCGAGGGCGAGAGTGGGGGCGGGCCGCGGCGGGCTCTGCGGGCAGTATACGTGCGCAGTGAGAGC
TCCCAGGGCGGCGCGGCCGGCGGCCCGGAGGCTGGGGCGCGGCAGTGCCTGCTGCGGGCCTGCGAGGCCG
AGGGCGCTCACCTCACCTCCGTGCCCTTCGGGGAGCTGGACTTCGGGGAGACGGCCGTGCTCGACGCCTT
CTACGACGCAGATGTTGCTGTGGTAGACATGAGCGATGTCTCCAGACAGCCTTCCCTCTTCTACCATCTT
GGAGTCCGAGAAAGCTTTGACATGGCCAATAATGTGATCTTGTACCATGACACCGATGCCGACACTGCTC
TCTCTTTGAAGGACATGGTAACTCAAAAAAACACAGCATCCAGTGGAAATTATTATTTCATCCCATACAT
CGTGACACCGTGCGCTGATTATTTTTGCTGCGAGAGTGATGCCCAGAGACGAGCCTCCGAGTACATGCAG
CCCAACTGGGACAACATCCTGGGCCCGCTGTGCATGCCTTTGGTGGACAGGTTCATTAGCCTCCTTAAGG
ACATCCACGTGACCTCATGTGTTTATTACAAAGAAACCTTGTTAAATGACATCCGGAAAGCCAGAGAGAA
ATACCAAGGTGAGGAACTGGCGAAGGAGCTAGCTCGGATCAAGCTCCGCATGGATAATACTGAGGTTCTG
ACCTCAGACATCATCATTAACTTACTCCTGTCCTACCGTGATATCCAGGACTATGATGCGATGGTGAAGC
TGGTGGAAACACTGGAGATGCTGCCTACGTGTGATTTGGCCGATCAGCATAACATTAAATTCCACTATGC
GTTTGCACTGAATAGGAGAAACAGCACAGGTGACCGTGAGAAGGCTCTGCAGATCATGCTCCAGGTTCTG
CAGAGCTGTGATCACCCGGGCCCCGACATGTTCTGCCTGTGTGGGAGGATCTACAAGGACATCTTCTTGG
ATTCAGACTGCAAAGATGACACCAGCCGCGACAGCGCCATTGAGTGGTATCGCAAAGGGTTTGAACTCCA
GTCATCCCTCTATTCGGGAATTAATCTTGCAGTTTTGCTGATTGTTGCTGGACAACAATTTGAAACTTCC
TTGGAACTAAGGAAAATAGGTGTCCGGCTGAACAGTTTGTTGGGAAGAAAAGGGAGCTTGGAGAAAATGA
ACAATTACTGGGATGTGGGTCAGTTCTTCAGCGTCAGCATGCTGGCCCATGATGTCGGGAAAGCCGTCCA
GGCAGCAGAGAGGTTGTTCAAACTGAAACCTCCAGTCTGGTACCTGCGATCATTAGTTCAGAACTTGTTA
CTAATTCGGCGCTTCAAGAAAACCATTATTGAACACTCGCCCAGGCAAGAGCGGCTGAACTTCTGGTTAG
ATATAATTTTTGAGGCAACAAATGAAGTCACTAATGGACTCAGATTTCCAGTTCTGGTCATAGAGCCAAC
CAAAGTGTACCAGCCTTCTTATGTTTCCATAAACAATGAAGCCGAGGAGAGAACAGTTTCTTTATGGCAT
GTCTCACCCACAGAAATGAAACAGATGCACGAATGGAATTTTACAGCCTCTTCCATAAAGGGAATAAGCC
TATCAAAGTTTGATGAAAGGTGTTGTTTTCTTTATGTCCATGATAATTCTGATGACTTTCAAATCTACTT
TTCCACCGAAGAGCAGTGCAGTAGATTTTTCTCTTTGGTCAAAGAGATGATAACCAATACAGCAGGCAGT
ACGGTGGAGCTGGAGGGAGAGACCGATGGAGACACCTTGGAGTATGAGTATGACCATGATGCAAATGGTG
AGAGAGTTGTCTTGGGGAAAGGCACGTATGGGATTGTGTATGCTGGCCGAGATCTGAGCAATCAAGTGCG
AATAGCCATCAAAGAAATCCCGGAGAGAGATAGCAGGTATTCTCAGCCTCTGCACGAGGAGATAGCCCTG
CACAAGTACCTTAAGCACCGCAATATCGTTCAGTACCTGGGCTCTGTTTCAGAGAACGGCTACATTAAGA
TATTTATGGAGCAGGTGCCTGGAGGAAGCCTTTCTGCTCTTCTGCGATCCAAATGGGGGCCGATGAAGGA
ACCGACAATCAAGTTTTACACCAAACAGATCCTGGAGGGCCTTAAGTATCTTCATGAAAACCAGATCGTG
CACAGAGACATAAAGGGCGATAATGTTCTGGTGAACACCTACAGCGGAGTGGTGAAAATCTCCGATTTTG
GAACCTCGAAACGTCTTGCGGGTGTGAACCCCTGCACAGAGACTTTTACTGGCACCCTGCAGTACATGGC
ACCTGAGATAATTGACCAAGGGCCTCGCGGATATGGTGCCCCAGCCGATATCTGGTCCCTGGGCTGCACC
ATCATTGAGATGGCCACCAGCAAGCCTCCGTTCCATGAGCTTGGTGAGCCGCAGGCAGCCATGTTCAAAG
TGGGCATGTTTAAGATCCACCCTGAGATTCCAGAAGCCCTTTCAGCTGAAGCCCGAGCCTTCATTTTATC
CTGTTTCGAGCCTGACCCCCACAAACGTGCCACCACTGCTGAGCTACTGAGAGAGGGTTTCTTAAGGCAG
GTGAACAAGGGCAAGAAGAACCGAATTGCCTTCAAGCCCTCAGAAGGTCCCCGCGGTGTCGTCCTGGCCC
TGCCCACACAGGGAGAGCCCATGGCCACCAGCAGCAGCGAGCACGGCTCTGTCTCCCCAGACTCCGACGC
CCAGCCTGACGCACTCTTTGAGAGGACCCGGGCGCCCAGGCACCACCTTGGCCACCTCCTCAGTGTTCCA
GACGAGAGCTCAGCCTTGGAAGACCGGGGCTTGGCCTCGTCCCCGGAGGACAGGGACCAGGGCCTCTTCC
TGCTACGCAAGGACAGTGAGCGCCGTGCCATCCTGTACAAAATCCTCTGGGAGGAGCAGAACCAGGTGGC
TTCCAACCTGCAGGAGTGTGTGGCCCAGAGTTCCGAAGAGTTGCATCTCTCAGTTGGACACATCAAGCAA
ATCATTGGGATCCTGAGGGACTTCATCCGCTCCCCAGAGCACCGGGTGATGGCGACCACAATATCAAAGC
TCAAGGTGGACCTGGACTTTGACAGCTCGTCCATCAGTCAGATTCACCTGGTGCTGTTCGGATTTCAGGA
TGCCGTAAATAAAATTTTGAGGAACCACTTAATTAGGCCCCACTGGATGTTCGCGATGGACAACATCATC
CGCCGAGCGGTGCAGGCCGCGGTCACCATTCTCATCCCAGAGCTCCGAGCCCACTTTGAGCCTACCTGTG
AGACTGAAGGGGTAGATAAGGACATGGATGAAGCGGAAGAGGGCTATCCCCCAGCCACCGGACCTGGCCA
GGAGGCCCAGCCCCACCAGCAGCACCTGAGCCTCCAGCTGGGTGAGCTCAGACAGGAGACCAACAGACTT
TTGGAACACCTAGTTGAAAAAGAGAGAGAGTACCAGAATCTTCTGCGGCAAACTCTAGAACAGAAAACTC
AAGAATTGTATCACCTTCAGTTAAAATTAAAATCGAATTGTATTACAGAGAACCCAGCAGGCCCCTACGG
GCAGAGAACAGATAAAGAGCTTATAGACTGGTTGCGGCTGCAAGGAGCTGATGCAAAGACAATTGAAAAG
ATTGTTGAAGAGGGTTATACACTTTCGGATATTCTTAATGAGATCACTAAGGAAGATCTAAGATACCTTC
GACTACGGGGTGGTCTCCTCTGCAGACTCTGGAGTGCGGTCTCCCAGTACAGAAGGGCTCAGGAGGCCTC
AGAAACCAAAGACAAGGCTTGA

Translation (1313 aa):
MESGGGNAPAGALGAASESPQCPPPPGVEGAAGPAEPDGAAEGAAGGSGEGESGGGPRRALRAVYVRSES
SQGGAAGGPEAGARQCLLRACEAEGAHLTSVPFGELDFGETAVLDAFYDADVAVVDMSDVSRQPSLFYHL
GVRESFDMANNVILYHDTDADTALSLKDMVTQKNTASSGNYYFIPYIVTPCADYFCCESDAQRRASEYMQ
PNWDNILGPLCMPLVDRFISLLKDIHVTSCVYYKETLLNDIRKAREKYQGEELAKELARIKLRMDNTEVL
TSDIIINLLLSYRDIQDYDAMVKLVETLEMLPTCDLADQHNIKFHYAFALNRRNSTGDREKALQIMLQVL
QSCDHPGPDMFCLCGRIYKDIFLDSDCKDDTSRDSAIEWYRKGFELQSSLYSGINLAVLLIVAGQQFETS
LELRKIGVRLNSLLGRKGSLEKMNNYWDVGQFFSVSMLAHDVGKAVQAAERLFKLKPPVWYLRSLVQNLL
LIRRFKKTIIEHSPRQERLNFWLDIIFEATNEVTNGLRFPVLVIEPTKVYQPSYVSINNEAEERTVSLWH
VSPTEMKQMHEWNFTASSIKGISLSKFDERCCFLYVHDNSDDFQIYFSTEEQCSRFFSLVKEMITNTAGS
TVELEGETDGDTLEYEYDHDANGERVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL
HKYLKHRNIVQYLGSVSENGYIKIFMEQVPGGSLSALLRSKWGPMKEPTIKFYTKQILEGLKYLHENQIV
HRDIKGDNVLVNTYSGVVKISDFGTSKRLAGVNPCTETFTGTLQYMAPEIIDQGPRGYGAPADIWSLGCT
IIEMATSKPPFHELGEPQAAMFKVGMFKIHPEIPEALSAEARAFILSCFEPDPHKRATTAELLREGFLRQ
VNKGKKNRIAFKPSEGPRGVVLALPTQGEPMATSSSEHGSVSPDSDAQPDALFERTRAPRHHLGHLLSVP
DESSALEDRGLASSPEDRDQGLFLLRKDSERRAILYKILWEEQNQVASNLQECVAQSSEELHLSVGHIKQ
IIGILRDFIRSPEHRVMATTISKLKVDLDFDSSSISQIHLVLFGFQDAVNKILRNHLIRPHWMFAMDNII
RRAVQAAVTILIPELRAHFEPTCETEGVDKDMDEAEEGYPPATGPGQEAQPHQQHLSLQLGELRQETNRL
LEHLVEKEREYQNLLRQTLEQKTQELYHLQLKLKSNCITENPAGPYGQRTDKELIDWLRLQGADAKTIEK
IVEEGYTLSDILNEITKEDLRYLRLRGGLLCRLWSAVSQYRRAQEASETKDKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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