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Report for CCDS41483.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41483.1 Public Homo sapiens 10 NET1 24 110 108 CCDS HistoryNCBI Gene:10276Re-query CCDS DB by CCDS ID:41483.1Re-query CCDS DB by GeneID:10276See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41483.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355029.9 ENSP00000347134.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355029.9Link to Ensembl Protein Viewer:ENSP00000347134.4Re-query CCDS DB by Nucleotide ID:ENST00000355029Re-query CCDS DB by Protein ID:ENSP00000347134
Original member Current member NCBI NM_001047160.3 NP_001040625.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001047160.3Link to Protein Sequence:NP_001040625.1Re-query CCDS DB by Nucleotide ID:NM_001047160Re-query CCDS DB by Protein ID:NP_001040625Link to BLAST:NP_001040625.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001040625.1 596 Q7Z628-1 596 100% 0 0

Chromosomal Locations for CCDS 41483.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 5412693 5412820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5426655 5426721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5429170 5429229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5451830 5451937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5452358 5452525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5452858 5452920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5453250 5453346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5453484 5453560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5454265 5454522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5454948 5455118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5456087 5456273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 5456588 5456994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1791 nt):
ATGGAGCCCGAGCTGGCGGCTCAGAAGCAGCCTCGACCGCGGAGGCGAAGCCGCCGGGCCTCTGGGCTCA
GCACGGAGGGAGCGACGGGGCCTTCGGCCGACACCTCCGGGTCGGAGCTGGACGGGAGATGTTCCCTTCG
GAGAGGCAGCTCCTTCACATTCTTAACACCTGGCCCCAACTGGGACTTCACTTTGAAAAGAAAACGCAGA
GAGAAAGATGATGATGTTGTAAGCCTTAGCAGCCTTGATCTGAAGGAGCCAAGCAATAAAAGAGTTCGAC
CTCTGGCTCGTGTCACGTCCTTGGCAAATTTAATCTCTCCTGTAAGAAATGGAGCTGTCAGACGTTTTGG
TCAAACAATACAGTCATTTACCCTTCGTGGTGACCACAGATCCCCAGCCTCTGCCCAGAAGTTTTCTAGC
AGGTCAACAGTCCCAACACCCGCCAAGAGAAGGAGCAGTGCACTGTGGTCAGAGATGCTGGACATCACCA
TGAAGGAGTCTCTCACCACCAGGGAGATCAGACGGCAGGAGGCAATATATGAAATGTCCCGAGGTGAACA
GGATTTAATTGAGGATCTCAAACTTGCAAGAAAGGCCTATCATGACCCCATGTTAAAGTTGTCCATCATG
TCAGAAGAGGAACTCACACATATATTTGGTGATCTGGACTCTTACATACCTCTGCATGAAGATTTGTTGA
CAAGAATAGGAGAAGCAACCAAGCCTGATGGAACAGTGGAGCAGATTGGTCACATTCTCGTGAGCTGGTT
ACCGCGCTTGAATGCCTACAGAGGTTACTGTAGTAACCAGCTGGCAGCCAAAGCTCTTCTTGATCAAAAG
AAACAGGATCCAAGAGTCCAAGACTTCCTCCAGCGATGTCTCGAGTCTCCCTTCAGTCGAAAACTAGATC
TTTGGAGTTTCCTAGATATCCCTCGAAGTCGCCTAGTCAAATACCCTTTACTGTTAAAAGAAATTCTTAA
ACACACTCCAAAAGAGCACCCTGATGTTCAGCTTCTGGAGGATGCTATATTGATAATACAGGGAGTCCTC
TCTGATATCAACTTGAAGAAAGGTGAATCCGAGTGCCAGTATTACATCGACAAGCTGGAGTACCTGGATG
AAAAGCAGAGGGACCCCAGAATCGAAGCGAGCAAAGTGCTGCTGTGCCATGGGGAGCTGCGGAGCAAGAG
TGGACATAAACTTTACATTTTCCTGTTTCAAGACATCTTGGTTCTGACTCGGCCCGTCACACGGAACGAA
CGGCACTCTTACCAGGTTTACCGGCAGCCAATCCCAGTCCAAGAGCTAGTCCTAGAAGACCTGCAGGATG
GAGATGTGAGAATGGGAGGCTCCTTTCGAGGAGCTTTCAGTAACTCAGAGAAAGCTAAAAATATCTTTAG
AATTCGCTTCCATGACCCCTCTCCAGCCCAGTCTCACACTCTGCAAGCCAATGACGTGTTCCACAAGCAG
CAGTGGTTCAACTGTATTCGAGCGGCCATTGCCCCCTTCCAGTCGGCAGGCAGTCCACCTGAGCTGCAGG
GCCTGCCGGAGCTGCACGAAGAGTGTGAGGGGAACCACCCCTCTGCGAGGAAACTCACAGCCCAGAGGAG
GGCATCCACAGTTTCCAGTGTTACTCAGGTAGAAGTTGATGAAAACGCTTACAGATGTGGCTCTGGCATG
CAGATGGCAGAGGACAGCAAGAGCTTAAAGACACACCAGACACAGCCCGGCATCCGAAGAGCGAGGGACA
AAGCCCTTTCTGGTGGCAAACGGAAAGAGACTTTGGTGTAG

Translation (596 aa):
MEPELAAQKQPRPRRRSRRASGLSTEGATGPSADTSGSELDGRCSLRRGSSFTFLTPGPNWDFTLKRKRR
EKDDDVVSLSSLDLKEPSNKRVRPLARVTSLANLISPVRNGAVRRFGQTIQSFTLRGDHRSPASAQKFSS
RSTVPTPAKRRSSALWSEMLDITMKESLTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIM
SEEELTHIFGDLDSYIPLHEDLLTRIGEATKPDGTVEQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQK
KQDPRVQDFLQRCLESPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAILIIQGVL
SDINLKKGESECQYYIDKLEYLDEKQRDPRIEASKVLLCHGELRSKSGHKLYIFLFQDILVLTRPVTRNE
RHSYQVYRQPIPVQELVLEDLQDGDVRMGGSFRGAFSNSEKAKNIFRIRFHDPSPAQSHTLQANDVFHKQ
QWFNCIRAAIAPFQSAGSPPELQGLPELHEECEGNHPSARKLTAQRRASTVSSVTQVEVDENAYRCGSGM
QMAEDSKSLKTHQTQPGIRRARDKALSGGKRKETLV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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