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Report for CCDS44272.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44272.1 Public Homo sapiens 1 RGS4 24 110 108 CCDS HistoryNCBI Gene:5999Re-query CCDS DB by CCDS ID:44272.1Re-query CCDS DB by GeneID:5999See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44272.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367906.7 ENSP00000356882.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367906.7Link to Ensembl Protein Viewer:ENSP00000356882.3Re-query CCDS DB by Nucleotide ID:ENST00000367906Re-query CCDS DB by Protein ID:ENSP00000356882
Original member Current member EBI ENST00000527809.5 ENSP00000433261.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527809.5Link to Ensembl Protein Viewer:ENSP00000433261.1Re-query CCDS DB by Nucleotide ID:ENST00000527809Re-query CCDS DB by Protein ID:ENSP00000433261
Original member Current member NCBI NM_001113380.1 NP_001106851.1 Accepted alive Link to Nucleotide Sequence:NM_001113380.1Link to Protein Sequence:NP_001106851.1Re-query CCDS DB by Nucleotide ID:NM_001113380Re-query CCDS DB by Protein ID:NP_001106851Link to BLAST:NP_001106851.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106851.1 187 P49798-5 187 100% 0 0

Chromosomal Locations for CCDS 44272.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 163072405 163072499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 163072805 163072866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 163073456 163073622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 163074321 163074560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (564 nt):
ATGAAACATCGGCTAGGTTTCCTGCTGCAAAAATCTGATTCCTGTGAACACAATTCTTCCCACAACAAGA
AGGACAAAGTGGTTATTTGCCAGAGAGTGAGCCAAGAGGAAGTCAAGAAATGGGCTGAATCACTGGAAAA
CCTGATTAGTCATGAATGTGGGCTGGCAGCTTTCAAAGCTTTCTTGAAGTCTGAATATAGTGAGGAGAAT
ATTGACTTCTGGATCAGCTGTGAAGAGTACAAGAAAATCAAATCACCATCTAAACTAAGTCCCAAGGCCA
AAAAGATCTATAATGAATTCATCTCAGTCCAGGCAACCAAAGAGGTGAACCTGGATTCTTGCACCAGGGA
AGAGACAAGCCGGAACATGCTAGAGCCTACAATAACCTGCTTTGATGAGGCCCAGAAGAAGATTTTCAAC
CTGATGGAGAAGGATTCCTACCGCCGCTTCCTCAAGTCTCGATTCTATCTTGATTTGGTCAACCCGTCCA
GCTGTGGGGCAGAAAAGCAGAAAGGAGCCAAGAGTTCAGCAGACTGTGCTTCCCTGGTCCCTCAGTGTGC
CTAA

Translation (187 aa):
MKHRLGFLLQKSDSCEHNSSHNKKDKVVICQRVSQEEVKKWAESLENLISHECGLAAFKAFLKSEYSEEN
IDFWISCEEYKKIKSPSKLSPKAKKIYNEFISVQATKEVNLDSCTREETSRNMLEPTITCFDEAQKKIFN
LMEKDSYRRFLKSRFYLDLVNPSSCGAEKQKGAKSSADCASLVPQCA


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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