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Report for CCDS3331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3331.1 Public Homo sapiens 3 IQCG 24 110 108 CCDS HistoryNCBI Gene:84223Re-query CCDS DB by CCDS ID:3331.1Re-query CCDS DB by GeneID:84223See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265239.11 ENSP00000265239.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265239.11Link to Ensembl Protein Viewer:ENSP00000265239.6Re-query CCDS DB by Nucleotide ID:ENST00000265239Re-query CCDS DB by Protein ID:ENSP00000265239
Original member Current member EBI ENST00000455191.5 ENSP00000407736.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455191.5Link to Ensembl Protein Viewer:ENSP00000407736.1Re-query CCDS DB by Nucleotide ID:ENST00000455191Re-query CCDS DB by Protein ID:ENSP00000407736
Original member Current member NCBI NM_001134435.3 NP_001127907.1 Accepted alive Link to Nucleotide Sequence:NM_001134435.3Link to Protein Sequence:NP_001127907.1Re-query CCDS DB by Nucleotide ID:NM_001134435Re-query CCDS DB by Protein ID:NP_001127907Link to BLAST:NP_001127907.1
Original member Current member NCBI NM_001323027.2 NP_001309956.1 Accepted alive Link to Nucleotide Sequence:NM_001323027.2Link to Protein Sequence:NP_001309956.1Re-query CCDS DB by Nucleotide ID:NM_001323027Re-query CCDS DB by Protein ID:NP_001309956Link to BLAST:NP_001309956.1
Original member Current member NCBI NM_032263.5 NP_115639.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032263.5Link to Protein Sequence:NP_115639.1Re-query CCDS DB by Nucleotide ID:NM_032263Re-query CCDS DB by Protein ID:NP_115639Link to BLAST:NP_115639.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127907.1 443 Q9H095-1 443 100% 0 0
NP_001309956.1 443 Q9H095-1 443 100% 0 0
NP_115639.1 443 Q9H095-1 443 100% 0 0

Chromosomal Locations for CCDS 3331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 197889580 197889714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197891446 197891547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197892628 197892759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197912675 197912749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197913881 197914042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197926024 197926105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197932174 197932302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197938548 197938780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197943778 197944051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 197945620 197945627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1332 nt):
ATGGAAGAAGACAGCCTGGAAGACTCAAACCTTCCTCCAAAAGTTTGGCATTCTGAGATGACGGTGTCAG
TGACAGGCGAACCACCTAGTACCGTAGAAGAAGAAGGAATACCTAAAGAAACAGACATAGAAATCATCCC
AGAAATCCCGGAAACTCTAGAGCCACTGTCCCTTCCAGATGTGCTGAGGATCTCGGCAGTTCTGGAGGAC
ACCACAGACCAGCTCTCTATTCTGAACTACATCATGCCCGTTCAGTACGAAGGGAGACAGAGCATCTGCG
TGAAAAGCAGAGAAATGAATCTAGAAGGAACGAATCTAGACAAACTTCCAATGGCCTCAACAATCACAAA
AATACCCAGTCCGTTAATAACTGAGGAAGGACCCAACTTGCCAGAAATCAGACACAGAGGCCGGTTCGCT
GTGGAGTTTAACAAAATGCAGGATCTTGTCTTCAAAAAACCTACAAGGCAGACCATCATGACTACGGAGA
CACTGAAGAAAATTCAGATTGATAGGCAGTTTTTCAGCGATGTGATTGCAGATACCATTAAGGAGTTGCA
AGATTCGGCCACTTACAACAGTCTCCTGCAAGCTTTGAGCAAAGAGAGGGAAAACAAAATGCATTTCTAT
GACATCATTGCCAGGGAGGAAAAAGGAAGAAAACAGATAATATCACTTCAAAAACAGCTAATTAATGTCA
AAAAGGAATGGCAATTTGAAGTCCAGAGTCAGAATGAGTATATTGCTAACCTCAAGGACCAACTGCAAGA
GATGAAGGCAAAATCCAACTTGGAGAATCGCTACATGAAAACCAATACCGAGCTGCAGATTGCCCAGACC
CAGAAAAAGTGTAACAGAACAGAGGAACTCTTGGTGGAAGAGATTGAGAAACTCAGGATGAAAACCGAAG
AAGAGGCCCGGACTCATACAGAGATTGAAATGTTCCTTAGAAAGGAGCAGCAGAAACTTGAGGAGAGGCT
GGAGTTCTGGATGGAGAAATACGATAAGGACACAGAAATGAAACAGAATGAACTAAATGCTCTCAAAGCC
ACAAAGGCCAGTGACTTAGCACACCTTCAAGACCTGGCAAAGATGATAAGAGAGTATGAACAGGTCATCA
TTGAAGATCGTATAGAAAAGGAGAGGAGCAAGAAGAAGGTAAAACAGGATCTCTTGGAATTAAAGAGCGT
TATAAAGCTCCAGGCCTGGTGGCGAGGCACTATGATACGGAGAGAAATTGGTGGTTTCAAGATGCCTAAA
GACAAAGTTGATAGCAAGGATTCAAAAGGCAAAGGTAAAGGCAAGGATAAGAGGAGAGGCAAGAAGAAGT
GA

Translation (443 aa):
MEEDSLEDSNLPPKVWHSEMTVSVTGEPPSTVEEEGIPKETDIEIIPEIPETLEPLSLPDVLRISAVLED
TTDQLSILNYIMPVQYEGRQSICVKSREMNLEGTNLDKLPMASTITKIPSPLITEEGPNLPEIRHRGRFA
VEFNKMQDLVFKKPTRQTIMTTETLKKIQIDRQFFSDVIADTIKELQDSATYNSLLQALSKERENKMHFY
DIIAREEKGRKQIISLQKQLINVKKEWQFEVQSQNEYIANLKDQLQEMKAKSNLENRYMKTNTELQIAQT
QKKCNRTEELLVEEIEKLRMKTEEEARTHTEIEMFLRKEQQKLEERLEFWMEKYDKDTEMKQNELNALKA
TKASDLAHLQDLAKMIREYEQVIIEDRIEKERSKKKVKQDLLELKSVIKLQAWWRGTMIRREIGGFKMPK
DKVDSKDSKGKGKGKDKRRGKKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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