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Report for CCDS44556.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44556.1 Public Homo sapiens 11 MUC15 24 110 108 CCDS HistoryNCBI Gene:143662Re-query CCDS DB by CCDS ID:44556.1Re-query CCDS DB by GeneID:143662See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 44556.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281268.12 ENSP00000281268.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000281268.12Link to Ensembl Protein Viewer:ENSP00000281268.8Re-query CCDS DB by Nucleotide ID:ENST00000281268Re-query CCDS DB by Protein ID:ENSP00000281268
Original member Current member EBI ENST00000527569.1 ENSP00000431945.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527569.1Link to Ensembl Protein Viewer:ENSP00000431945.1Re-query CCDS DB by Nucleotide ID:ENST00000527569Re-query CCDS DB by Protein ID:ENSP00000431945
Original member Current member NCBI NM_001135092.2 NP_001128564.1 Accepted alive Link to Nucleotide Sequence:NM_001135092.2Link to Protein Sequence:NP_001128564.1Re-query CCDS DB by Nucleotide ID:NM_001135092Re-query CCDS DB by Protein ID:NP_001128564Link to BLAST:NP_001128564.1

Chromosomal Locations for CCDS 44556.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 26561065 26561225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 26565165 26565896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 26567052 26567094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGGCATAATACAATCTATTCTTGCCACATCAAGGGATTGTTATTCCTTTAAAAAAAAACCAATACCAA
AGAAGCCTACAATGTTGGCCTTAGCCAAAATTCTGTTGATTTCAACGTTGTTTTATTCACTTCTATCGGG
GAGCCATGGAAAAGAAAATCAAGACATAAACACAACACAGAACATTGCAGAAGTTTTTAAAACAATGGAA
AATAAACCTATTTCTTTGGAAAGTGAAGCAAACTTAAACTCAGATAAAGAAAATATAACCACCTCAAATC
TCAAGGCGAGTCATTCCCCTCCTTTGAATCTACCCAACAACAGCCACGGAATAACAGATTTCTCCAGTAA
CTCATCAGCAGAGCATTCTTTGGGCAGTCTAAAACCCACATCTACCATTTCCACAAGCCCTCCCTTGATC
CATAGCTTTGTTTCTAAAGTGCCTTGGAATGCACCTATAGCAGATGAAGATCTTTTGCCCATCTCAGCAC
ATCCCAATGCTACACCTGCTCTGTCTTCAGAAAACTTCACTTGGTCTTTGGTCAATGACACCGTGAAAAC
TCCTGATAACAGTTCCATTACAGTTAGCATCCTCTCTTCAGAACCAACTTCTCCATCTGTGACCCCCTTG
ATAGTGGAACCAAGTGGATGGCTTACCACAAACAGTGATAGCTTCACTGGGTTTACCCCTTATCAAGAAA
AAACAACTCTACAGCCTACCTTAAAATTCACCAATAATTCAAAACTCTTTCCAAATACGTCAGATCCCCA
AAAAGTTCTGCGATTAGACAATGCACCGGAACCTTATGATGTGAGTTTTGGGAATTCTAGCTACTACAAT
CCAACTTTGAATGATTCAGCCATGCCAGAAAGTGAAGAAAATGCACGTGATGGCATTCCTATGGATGACA
TACCTCCACTTCGTACTTCTGTATAG

Translation (311 aa):
MGIIQSILATSRDCYSFKKKPIPKKPTMLALAKILLISTLFYSLLSGSHGKENQDINTTQNIAEVFKTME
NKPISLESEANLNSDKENITTSNLKASHSPPLNLPNNSHGITDFSSNSSAEHSLGSLKPTSTISTSPPLI
HSFVSKVPWNAPIADEDLLPISAHPNATPALSSENFTWSLVNDTVKTPDNSSITVSILSSEPTSPSVTPL
IVEPSGWLTTNSDSFTGFTPYQEKTTLQPTLKFTNNSKLFPNTSDPQKVLRLDNAPEPYDVSFGNSSYYN
PTLNDSAMPESEENARDGIPMDDIPPLRTSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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